Gene Cagg_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2908 
Symbol 
ID7268780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3568785 
End bp3569180 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content55% 
IMG OID643567729 
ProductD-ribose pyranase 
Protein accessionYP_002464204 
Protein GI219849771 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0315293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CCTTGTTGTT AAACAGTGTG CTGTCCGAAT TGATTGCCAG TCTCGGTCAT 
GGCGATATGG TCGTGATCGG CGATGCCGGC TTACCAATTC CGCCAGAGAC ACGGCGGATC
GATCTGGCGT TGTGCCGTGG GATACCGCCG TTGCTTGAGA CGGTGCGGGT GATAGCGAGC
GAGATGCAGG TTGAGAAAGC GCTGATCGCG ACGGAGACCG GCCAACGCAG TCCGCACATT
CGTGACGGTT TGGGACAGCT TTTACCGAAC ACCCCCTTTG AAGAGGTAAG TCACGAGCAG
CTCAAGGCAT TATGTCGGCA AGCACGGGCA GTGGTGCGCA CCGGTGAATA CACTCCATAC
GCCAATGTGA TCTTAGTAGC CGGTGTGGTC TTCTAA
 
Protein sequence
MKKTLLLNSV LSELIASLGH GDMVVIGDAG LPIPPETRRI DLALCRGIPP LLETVRVIAS 
EMQVEKALIA TETGQRSPHI RDGLGQLLPN TPFEEVSHEQ LKALCRQARA VVRTGEYTPY
ANVILVAGVV F