Gene Cagg_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2907 
Symbol 
ID7268779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3567781 
End bp3568752 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content56% 
IMG OID643567728 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002464203 
Protein GI219849770 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0357751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAT TCTCACTCAC CGATGAACTG ATCGATCGCC GCACATTCGG ACAACACTTT 
GGCCTGATTA TTATCTTCGG CTTATTAGTG CTCGGCCTGA CCCTGCTGTC CGACCGTTTT
CTGACGCTGG CCAACTTGAC CAATATTCTG CGCCAAACTG CCATCAACAG CATCATCAGC
GCCGGGATGA CGTTGGTGAT CTTAACGGGA GGGATCGATC TCTCGGTGGG ATCAGTGCTG
GCCTTATCGG TAACAATCGG CGCGGTGTTG ATGAAACAGG GTTGGCCGGT TGAGATCAGT
GTGCTTGCTG CATTGGCAAC CGGCGCCAGC CTTGGCTGCA TCAACGGCGT ACTGATTACA
CTAGCGCGCA TCCCGCCCTT CATCACCACG CTTGGGATGC TGACGATGGC GCGCGGCCTG
ACGCTGATGT ATACCCAAGG CCAACCCATC ACTGGTTTTC CGGCAACCTT CCGTTGGCTT
GGTACTGGTG ATGTTGCCGA AATCCCCGTG CCAATCGTGC TCATGCTGTT GGTCTTTGTG
GCCGGCGGGT TCTTTCTCTA CCGCACTAGC TTCGGGATGC AAATCTATCT GCTCGGCGAC
AATCCCACGG CTGCTCGCCT GACCGGGGTA CCGGTCAACC GGCTAACGGT GTTGGTGTAC
ACCATCTCAG GGTTCTGTGC TGCCTTAGCC GGCTTAATTC TGATTGCCCG GCTCGATTCG
GCCCAACCGA CTATTGGCCT CGGCTACGAA CTCAACGCGA TAGCTGCGGT AGTCGTTGGT
GGAACCGGTT TCAGCGGCGG TGAAGGGGGA CTGGTTGGTA CGCTGTTGGG GGCGCTATTG
ATCGAAACCC TCAATAATGG TCTCAATCTA CTCAACGTCT CACCACTCTG GGAACAAGTT
GTGAAGGGGG TAGTTATTGC GCTGGCTCTC CTACTCTATC GACTGATCAG TCGCACGGCG
CAATCTACAT AA
 
Protein sequence
MRAFSLTDEL IDRRTFGQHF GLIIIFGLLV LGLTLLSDRF LTLANLTNIL RQTAINSIIS 
AGMTLVILTG GIDLSVGSVL ALSVTIGAVL MKQGWPVEIS VLAALATGAS LGCINGVLIT
LARIPPFITT LGMLTMARGL TLMYTQGQPI TGFPATFRWL GTGDVAEIPV PIVLMLLVFV
AGGFFLYRTS FGMQIYLLGD NPTAARLTGV PVNRLTVLVY TISGFCAALA GLILIARLDS
AQPTIGLGYE LNAIAAVVVG GTGFSGGEGG LVGTLLGALL IETLNNGLNL LNVSPLWEQV
VKGVVIALAL LLYRLISRTA QST