Gene Cagg_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2904 
Symbol 
ID7268776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3564234 
End bp3565202 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content56% 
IMG OID643567725 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002464200 
Protein GI219849767 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0339421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG CATCGCTGAA TTGGGCGCGA CGCACATTGG CATACCGTCA GCTAGGGACG 
TATGGAATGT TGGTAGCCCT GGCGATCTGG TTTACATTAT TTTCACCGCA GTTTCTGACG
GTGAACAACC TGCTGACACT TACTTTACAA ACATCACTGA TCGCGCTGGT CGCGATTGGC
ATGACATTCA CGATCATTAT CGGTGGCATT GATCTGTCGG TAGGCTCGAC CGCAGCGCTA
GCCGGTGCGA TTGCAGCCGG CATAGCGGTG CAATTTGGGA CGTATCCGGG CCTCTTGGCT
GGAATGATGA CCGGGATCGG CATTGGGTTC ATCAACGGTG CGTTGATCGT ATGGGGGCGT
CTACCGCCAT TTGTTGCCAC CCTTGCCAGT ATGGCAGCCG CACGCGGCTT GACACTGGTG
TACACACAAG GCCGTCCTAT TGCCGGTCTT GATCGTACTT TCACTGTTTG GGGAAGCGAT
TCTCTGTTTG GAGTACCGAT ACCGGTCTGG GTGTTGCTAT GCACCGCCCT CATTGCCCAT
CTGGTCTTGC GCCAAACACG CCTTGGCCTA CACCTCTACG CAGTCGGCGG CAATGAAGAG
ACTGCACGGT TAGCGGGGGT CAACGTACCA CAGGTCACAT TCAGCGCTTA CCTGATCAGC
GGATGGTTTG CAGCCTTGAG TGGCATCATT CTCACGGCGC GCCTGTGGTC GGCCCAGCCC
AACACCGGGA TCGGTCTCGA ACTCGACGCC ATCGCTGCGG CAGTATTAGG TGGGAGCAGC
TTAGCGGGTG GCAGCGGTGG AATAGTGGGC ACAATTGCCG GTTCGTTTAT CATCGGGATG
CTGGCAAATG GGTTGAATCT GCTGGGGGTA CCGTCGTACA ACCAGCAGGT CATCAAAGGT
TTAATCTTTA TCGCTGCGGT GATGATGACG GGGGGAATTG GGCGACCCAA CCGCAGACGA
GGCGCGTGA
 
Protein sequence
MTKASLNWAR RTLAYRQLGT YGMLVALAIW FTLFSPQFLT VNNLLTLTLQ TSLIALVAIG 
MTFTIIIGGI DLSVGSTAAL AGAIAAGIAV QFGTYPGLLA GMMTGIGIGF INGALIVWGR
LPPFVATLAS MAAARGLTLV YTQGRPIAGL DRTFTVWGSD SLFGVPIPVW VLLCTALIAH
LVLRQTRLGL HLYAVGGNEE TARLAGVNVP QVTFSAYLIS GWFAALSGII LTARLWSAQP
NTGIGLELDA IAAAVLGGSS LAGGSGGIVG TIAGSFIIGM LANGLNLLGV PSYNQQVIKG
LIFIAAVMMT GGIGRPNRRR GA