Gene Cagg_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2894 
Symbol 
ID7268766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3552754 
End bp3553551 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID643567716 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_002464191 
Protein GI219849758 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0151849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG ATGATCCGAT AACCGGCGAC CGCAGCCCAC TGATGCTCGA CCGGCGCAGT 
CGAATTGCCG AGCTTGTCCG TCAACGTGGT TCGGTGCGGG TGAACGAATT GGCCGAGTTT
TTCGGGGTTA CACCGGTGAC GATCCGCAAT GATCTGGCTG CGCTCGAACG GGAAGGGGTA
TTGATCCGCG ATCACGGCGG TGCCGTTGCT CTACCGACCA CGAGCGCGCT CATTGCCTTT
GAGCAGCGAA CCGGTCTTCG CCTCGAAGCG AAAGCACGCA TTGGAGCCGC TGCTGCGCAG
TTTGTCAATC CCGGCGATAC CATCTTGCTC GACGCTGGGA CGACAGTGGT CGAGATGGTA
AAGCATCTGC GCCAACGTAC TCCGCTGACG GTCGTTACTA ACGCTCTCAA TGTGGTGATT
GAGTTACGCC ATCTAAACGA CGTGCAGGTC TGGATGCTCG GTGGGATGGT GCATTACGCC
ACCTTTGGCA CCTTAGGCCC ACTGGTTGAA CAGAGTTTGG GTCATTTAGT CGTCGAGAAA
CTGTTTCTCG CTGCCGAGTC GGTCGATGCA AGCTACGGTG TGACCGACTC GACCAGCGAG
ATTGCCCAAA CCAAACGCGC GTTGGCACGG GCTGCACGTC GGATCATTCT GTTAGCCGAT
TCGAGTAAGT GGCAACGACG CGGGTTTATT AAGGTCTTGC CGTTTGAGTC GATCGAAACG
GTGATTACCG ACACCGACCT GCCCGAGATC GATCTACGAC GAATGGAGGA GGCCGGCGTG
CGGGTCATGC TGGTGTAG
 
Protein sequence
MPSDDPITGD RSPLMLDRRS RIAELVRQRG SVRVNELAEF FGVTPVTIRN DLAALEREGV 
LIRDHGGAVA LPTTSALIAF EQRTGLRLEA KARIGAAAAQ FVNPGDTILL DAGTTVVEMV
KHLRQRTPLT VVTNALNVVI ELRHLNDVQV WMLGGMVHYA TFGTLGPLVE QSLGHLVVEK
LFLAAESVDA SYGVTDSTSE IAQTKRALAR AARRIILLAD SSKWQRRGFI KVLPFESIET
VITDTDLPEI DLRRMEEAGV RVMLV