| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2889 |
|---|
| Symbol | |
|---|
| ID | 7268761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3545718 |
|---|
| End bp | 3547292 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643567711 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002464186 |
|---|
| Protein GI | 219849753 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0216745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGTT TGCTGGCGCT TCTCGCGTAT CTCGTGCCCC TCTCACCGGT GATGGTAGCG
GTGTTGGCGA TGTTGAGGCT TTTGCCATCG GTTGAATTGA CCTTTCAGCT TGGGCGAGCC
GTCAGCGTCG CTTCGTTTGG TTTGATGGTG ATATTGGGCG TGGTCGTTGT TCTGCATGGT
CCGCTGGTGA GTCCATTGAT CGGCATTGGT GAGGTGGGGC TGTCGCTGCG TCTCGATGCG
CTCAGTGTGA TGATGTCGTT GTTGGTTACG TTCCTCGGTT CAGTGCTGAT CCAATTTAGC
CGTAATTACC TCGATGGCGA TCCACGTCAG CAGCTCTTTT TTATCCGTTT GTACGTGACT
ATCAGCACCG TGTTGTTGAT GGTGCTGGCC GGTAATCTGT GGCAGTTGGT TGTGGCGTGG
GTGGCGACTA GTCTTGCGCT GCATACCCTG CTTGTCTTTT ACCCGGAACG CGCGCAAGCC
ATTCGGGCAG CGCGGAAGAA GTTTTTCGTT GCGCGGATCG GTGATGTCTG TCTGATCATC
GCGGCTGTGT TGCTGGCGCA GACCTTCGGT ACAACCGATC TTGGGATGTT GCGTGAGGCC
GCAGTGAACG CGCTGGCTGC CGGTATTGCA CCAACCGGTG CGGTCGTTGG GGCGCTGTTG
ATCGTGGTTG CTGCAACGCT GAAGTCGGCG ATGTTCCCGT TCCACGGCTG GTTGCTTGAA
GTGATGGAGA CACCGACACC GGTGTCGGCG TTGCTGCACG CCGGTTTGCT GAATGCCGGT
ACTTTTTTGG TCGTGCGGTT TGGTGAACTG GTCTTTTTGA ATCCGGCGGC GTTAGTCTTC
TTGATTGTCG TGGGTGGTTT GACTTCGATT ATTGCTTCCT CAGCGATGAT TACCCAGAGC
AGTGTTAAAG TGTCGCTGGC CTATTCGAGT GCAGCGCACA TGGGTTTTAT GCTGATGCTA
TGCGGTTTTG GTGCGCATAC GGTGGCGATT ATGCATCTCA TTGCCCACTC GTGCTACAAG
GCCCATGCCT TCCTTTCGTC GGGTAGTGTA ATCGAGTACG TGCGTAATAC CGGTGCCCAA
AAGCTTAATC AGGTGCCGCA TCCGTTTGCT TTGCTGGCGA ATATGGCGGT GGCAGTGCTG
ATGTTTTTAG CTGTGGCAAC TGCCATCGGG ATCGATATCA CCAAGCGCCC GGCTGAGACG
GCAATGGTCA CGATCTTTAT GACTGCCGTG GCTTATCTGT TGGTAAAGGG GACGACCGGC
AAAGCTCCGT TGTTTGTAAT CAGTCGCACG GTAGGTATGG CCGCGCTCGT GACACTGGCA
TTTTTTGCGC TCGAGGTGAT AGCCGAGGCT TTACTGAGTA GCGCGGTCGC CGTCTATCCG
CCACTCGATC CGATCACGTG GGTGGCAGTT GTGATGGCTG TCGGCGCGTT CATTATCGTG
ATGGTTCTGA GTTCCTACTT GCCTGCGCTT ACCCATCGAC CGGCGTGGCG CGCGTTCTAT
GTCCATCTCA AACACGGCTT TTACGCTAAC GCGATGTTCG ACCGTTTGCT CGATACCTTC
CGAATCGCTC GTTAG
|
|---|
| Protein sequence | MDGLLALLAY LVPLSPVMVA VLAMLRLLPS VELTFQLGRA VSVASFGLMV ILGVVVVLHG
PLVSPLIGIG EVGLSLRLDA LSVMMSLLVT FLGSVLIQFS RNYLDGDPRQ QLFFIRLYVT
ISTVLLMVLA GNLWQLVVAW VATSLALHTL LVFYPERAQA IRAARKKFFV ARIGDVCLII
AAVLLAQTFG TTDLGMLREA AVNALAAGIA PTGAVVGALL IVVAATLKSA MFPFHGWLLE
VMETPTPVSA LLHAGLLNAG TFLVVRFGEL VFLNPAALVF LIVVGGLTSI IASSAMITQS
SVKVSLAYSS AAHMGFMLML CGFGAHTVAI MHLIAHSCYK AHAFLSSGSV IEYVRNTGAQ
KLNQVPHPFA LLANMAVAVL MFLAVATAIG IDITKRPAET AMVTIFMTAV AYLLVKGTTG
KAPLFVISRT VGMAALVTLA FFALEVIAEA LLSSAVAVYP PLDPITWVAV VMAVGAFIIV
MVLSSYLPAL THRPAWRAFY VHLKHGFYAN AMFDRLLDTF RIAR
|
|---|
| |