Gene Cagg_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2887 
Symbol 
ID7268759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3544170 
End bp3544502 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content45% 
IMG OID643567709 
Productsmall multidrug resistance protein 
Protein accessionYP_002464184 
Protein GI219849751 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.014423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACT GGATCTATCT ACTTATTGCT ATCTTATTTG AGGTGATGGC AACATCGGCG 
CTGAAGGCCA GTGCCGGTTT CACTCGTTTA TGGCCCTCGA TTATGGTCGT AGTAGGGTAT
GCCATTTCAT TTTTTGCGAT GTCGCTTGCC TTAGAAGCTA TTCCGGTCGG TATCGCCTAC
GCGATCTGGT CGGGAATTGG GATTATCCTC ATTACGGCCA TTGCGTGGGT TCTCTACCGT
CAACAACCCG ATATATGGGC AATGGTAGGC ATCGGATTTA TCATTATAGG TGTTATTATT
CTGAATCTTT TGTCAAGAGT TGAAGTACAT TGA
 
Protein sequence
MKYWIYLLIA ILFEVMATSA LKASAGFTRL WPSIMVVVGY AISFFAMSLA LEAIPVGIAY 
AIWSGIGIIL ITAIAWVLYR QQPDIWAMVG IGFIIIGVII LNLLSRVEVH