Gene Cagg_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2880 
Symbol 
ID7269874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3536689 
End bp3537201 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID643567702 
Producthistidine triad (HIT) protein 
Protein accessionYP_002464177 
Protein GI219849744 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00137934 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.021176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA AGTATACGCC GTGGCGCATG CGCTACATCA AGCGGGGTGA TACTGCTGAT 
GAGGGGTGTG TCTTTTGTGC GATGGCCGCT GCCGATGGTC GTGATGATGC CGAGCGATTA
GTGCTTTATC GAGGGCGGCA GTGTTTTGTG GTGATGAACC TCTACCCCTA CAACACCGCG
CATCTGATGG TTGTGCCGTA TATGCATGTC GCCGATCTTA CGACACTTGA TAGTACAACG
GCGAACGAAC TCTTTTGGCT CACTCAGCGG AGTGTTGCGA TCATTCAGGC CGAATACGCC
CCGCATGGGT TCAACCTCGG TATGAATCTT GGTCGGGTCG CCGGGGCCGG AATTGCCGAT
CACTTGCACA TGCACATTGT GCCGCGTTGG AGTGGCGATA CCAATTTTAT GCCGGTGATT
GGTGATACCA AGCTGATCCC CGAGGCGTTG AACGAGACGT ATGACCGGTT ACGACCACAC
TTTGCCGCTC TCAGCTTAGC GTCCGATCAA TAA
 
Protein sequence
MEIKYTPWRM RYIKRGDTAD EGCVFCAMAA ADGRDDAERL VLYRGRQCFV VMNLYPYNTA 
HLMVVPYMHV ADLTTLDSTT ANELFWLTQR SVAIIQAEYA PHGFNLGMNL GRVAGAGIAD
HLHMHIVPRW SGDTNFMPVI GDTKLIPEAL NETYDRLRPH FAALSLASDQ