Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2880 |
Symbol | |
ID | 7269874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3536689 |
End bp | 3537201 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567702 |
Product | histidine triad (HIT) protein |
Protein accession | YP_002464177 |
Protein GI | 219849744 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00137934 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.021176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCA AGTATACGCC GTGGCGCATG CGCTACATCA AGCGGGGTGA TACTGCTGAT GAGGGGTGTG TCTTTTGTGC GATGGCCGCT GCCGATGGTC GTGATGATGC CGAGCGATTA GTGCTTTATC GAGGGCGGCA GTGTTTTGTG GTGATGAACC TCTACCCCTA CAACACCGCG CATCTGATGG TTGTGCCGTA TATGCATGTC GCCGATCTTA CGACACTTGA TAGTACAACG GCGAACGAAC TCTTTTGGCT CACTCAGCGG AGTGTTGCGA TCATTCAGGC CGAATACGCC CCGCATGGGT TCAACCTCGG TATGAATCTT GGTCGGGTCG CCGGGGCCGG AATTGCCGAT CACTTGCACA TGCACATTGT GCCGCGTTGG AGTGGCGATA CCAATTTTAT GCCGGTGATT GGTGATACCA AGCTGATCCC CGAGGCGTTG AACGAGACGT ATGACCGGTT ACGACCACAC TTTGCCGCTC TCAGCTTAGC GTCCGATCAA TAA
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Protein sequence | MEIKYTPWRM RYIKRGDTAD EGCVFCAMAA ADGRDDAERL VLYRGRQCFV VMNLYPYNTA HLMVVPYMHV ADLTTLDSTT ANELFWLTQR SVAIIQAEYA PHGFNLGMNL GRVAGAGIAD HLHMHIVPRW SGDTNFMPVI GDTKLIPEAL NETYDRLRPH FAALSLASDQ
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