| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2829 |
|---|
| Symbol | |
|---|
| ID | 7267535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3475198 |
|---|
| End bp | 3477330 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643567650 |
|---|
| Product | Tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_002464127 |
|---|
| Protein GI | 219849694 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG ACCGACAACT TGATCGTCGC TGGTGGGTAG CAGTCGTCTC ACTCACCGCG
CTGGCGCTGG TGATGCGATT GTTAGTTTGG CGCTGGCGCG AACTCTACCC ATTGGGCGGC
GATGAAGCTG AATATTTGGC GCAGGCCATC ACCTTGTTAC AAGAACGGCG CTACGTCGAG
TTACGTCTGA TGCGGCCACC ACTCTACCCG CTCTTCCTCG CCGCAACGAT TGTGGTCGTC
GACTCGTTGG TGCAAAACTT GCGGTTAGTA CAGGCGCTGA TCAGTACATT GACCGTACCC
CTGATCGCGC TGCTAGCGCG GACGCTCGCT CAGCGCAGTG CGCCGCAGAT GCCAACCTCG
TTTGCCCGCC GGGCCGGGTT ACTGGCCGGG TTGCTGACCG CATTCAACTA TACCCTGGCG
GCCAACGCCA CCGAATTATT GACCGAGACC CTCTTTTTGG CCGGCTTGAG TCTCCTGTTC
TGGTTGGTGA TCCGGCCAGC GCTGTCTTAC CGATTGGCGC TCATCGCCGG TCTGATACTC
GGTGCGCTCT GCCTGATTCG CTCGGTAGCA TTACCGCTGT TGCCACTGAC AATGGGCTGG
TGGTTGGTCA ACGCCATACG TGCCGAGCAC GTGCGCCGTG GGCTTGGTCA CGCCGCAATG
ATCTTGCTCG GATGTGCGCT GGTGATCGGG CCTTGGACGG TACGCAACAT GCTGACGTAT
GGCGGCGTGA TCCTCATCGA CACCACCGGG GCAGAAAATC TGTGGCTCGA TAACGACCCT
GCCGGGCGTG AAGCGGTAAA AGCACAGCTC TACGCACTCG GCGAAGACCG ACTACTGCGG
CAGCGTCTTG CCACCGAGCG CGGGATCGCG GTCATTACCG CCGATCCAAG CCGGTTCATC
GCCAAAATGA GCCGCGAGCT GCGCCTCTTC TTTGCACTCG AACAGGTTGA CGACATGCGG
GCGCGTCCGG CAATTTGGGT ATCGCCGGGA GAGCTGGTGG CGCGGTTGGT GGTGGGGGAT
GGGGTATGGT TGCTCATCCT CCTGACCGGC GGCTACGGTC TGGTGCGCCG CTGGCAACCT
GCTTCGGCAA CCGCAGAGGG TTTCTGGCGC TCACGGTGGT GCATCTTCGC CGACCCGCGT
TGGCTGCTGG GCGCGTGGGC AGCGTATGTC TTGCTCACCA CCTTAATCTT TCATGTCGAA
TTACGCTATC GCATACCGCT CTATCCGGTA TTGCTGGCCT ACAGCGGGAT GGTCGGGGCG
GCGCAATGGC CGATACCGTC GCGCACGTTG CCGCGGTCTC AGCCGGTAGC CTTGCTGGTG
CCCACGCTGG CGCTGGCAAT CACCCTCTGG CATGCACCCT ACCCCTGGCT CGGATGGCAG
TTAGTCGGCA AGCATTGGCT GCTCCGGCAG GCGGAACAAG CATTAGAACG GGGTGACTCG
CGGACTGCTG CTGCTGCTGC GCAACAGGCA CTCCATCGCG ATCAGCAGTC GGTTTTGGCG
AGAGTAGCCC TCGTGCGGGC CGCTCTGCTT GACGGCGACC AACCAACCGC TTTACGCTGG
CTCGATGAAG CGATCGCGGT GTTGCCGGCT CATCCCTATC CGCACCTGCT CCGCGGCGAT
CTCTTGCGGC AACAGGGTGA TCTGGCAGCG GCTCGTGCTG AGTTAACCAC CTTTGCTACC
GCTTCACGCG AGGATCTGGC GACATGGCTC TGGGAACGGA GCATTACACC ACCGCCGACC
GTCTTGAATC TTGGTGACGG GCTTGATCTC GGATTCATCC GCGGTATGCA TCATCCCGCT
GCCAATGAAC AAGGTTGGCG CTGGACAACC GGGTGGGCAC AGGTACGGTT GACAGTACCG
ACCGGCGCGG AGAGTATCGC CCTCACGATG CGCAGTGGCC GACCTGACGG CACGCCGGTG
CGGGTGTGGA TCACCGTCGC CAACGGCGCG CAATATTCGT TTGTGGTAGG AGCAGATTGG
CAGACGTTTA CCGTACCGTT CGTTTCACGC GATCAACCTC GCACGGTCGT GGTATCGATC
ACATCACCAA CCTTCTGGCC GCGCACCTAC GATCCGGCAA GTCCTGATGG TCGTCGGCTA
GGCGTGCAAG TGCGGCAGGT TGCAGTCCGT TAG
|
|---|
| Protein sequence | MDIDRQLDRR WWVAVVSLTA LALVMRLLVW RWRELYPLGG DEAEYLAQAI TLLQERRYVE
LRLMRPPLYP LFLAATIVVV DSLVQNLRLV QALISTLTVP LIALLARTLA QRSAPQMPTS
FARRAGLLAG LLTAFNYTLA ANATELLTET LFLAGLSLLF WLVIRPALSY RLALIAGLIL
GALCLIRSVA LPLLPLTMGW WLVNAIRAEH VRRGLGHAAM ILLGCALVIG PWTVRNMLTY
GGVILIDTTG AENLWLDNDP AGREAVKAQL YALGEDRLLR QRLATERGIA VITADPSRFI
AKMSRELRLF FALEQVDDMR ARPAIWVSPG ELVARLVVGD GVWLLILLTG GYGLVRRWQP
ASATAEGFWR SRWCIFADPR WLLGAWAAYV LLTTLIFHVE LRYRIPLYPV LLAYSGMVGA
AQWPIPSRTL PRSQPVALLV PTLALAITLW HAPYPWLGWQ LVGKHWLLRQ AEQALERGDS
RTAAAAAQQA LHRDQQSVLA RVALVRAALL DGDQPTALRW LDEAIAVLPA HPYPHLLRGD
LLRQQGDLAA ARAELTTFAT ASREDLATWL WERSITPPPT VLNLGDGLDL GFIRGMHHPA
ANEQGWRWTT GWAQVRLTVP TGAESIALTM RSGRPDGTPV RVWITVANGA QYSFVVGADW
QTFTVPFVSR DQPRTVVVSI TSPTFWPRTY DPASPDGRRL GVQVRQVAVR
|
|---|
| |