Gene Cagg_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2828 
Symbol 
ID7267534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3472768 
End bp3475062 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content60% 
IMG OID643567649 
Producthypothetical protein 
Protein accessionYP_002464126 
Protein GI219849693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.977111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATCT TTCACGATAA TCGCTATACC CAACACTGGC CGTTGCTGGT AGCCATACTC 
ATCGGCGTCA TCCTTCGGGT AGCGCTGTGG GGTAATCTGC CGCGGCTCGG TTTGATCTCC
GACGAAGCTG AGTATCTGGC CGCTGCCGAT TGGCTGGCCC ACGGACGTGG TTTTGCGTGG
CATACCGGCT ATCTCTGGAC GCGGGCGCCT CTCTATCCAC TCTTTTTAGC AGCCCATATC
GCACTGTTTG GACGTGACCT TGCGGTGATC TTCGTCAGCC AAACCGTGCT AAGCCTCCTG
AACGTGGGGT TGGTCTATGC CCTCGCCCGG CGGCTCGGCG CTACACCGCT CGTGGCCGGT
GGCGCCGCAT TCCTCAGCGC GATCGCGTTA CCGTTGGCGA TGTACCCGCA GTTTTTGTTA
AGTGAGACGC TGTTTATCAG TTTGTTGCTG ATAGCGTTCT CCTTCTTAGC CGATCCACAG
CGTCGGCAGC ATGTGTTCAT TGGTGGACTG TTTCTAGGCT TGGCGACCCT AACGCGCGGC
CTCCTACTCG GCTTTTTGCC ACTGGCTGCG CTCTGGATCG GTTGGCGTGC CGGCGGCAAC
CGGCGTGAAC GATTCATAGT AGCACTATTG CCGTTGCTGG CAGCAGGTAT CCTTATCGGG
CCGTGGGCAC TCTACGCCTC GCGCACGTAT GGCGGCTTGA TCGTGATCGA TACTACCGGT
GCGTACAATC TGGCACTGGG TGGACGTACC GCTTACGACG GAGGTCGGAG CGATGCGCCC
ACGCGCAACT TTACCTTGGC CCTGCTCGAT CCGTCACTCG ATGACGCAAC GCGCGCCACA
CTGATCGCCG GTTCGTGCCT CGCCCAAACC GGCGATCCAC GTCTCAGCAC CGCATTGGCG
AAACCGATCA CTGCGATCAC GCAAGCCGAA CGGCAACAAC TTCTCAGTGC CGAAGGGTGG
TGTCTGATCC GGGCAAAGCC GGCAGCATTC GTTGTAAAGA CGCTGATCGA ATTGGTTGAT
CTGTTTCAAA TCAACTTTAG TGGCGATGAG CGCCTGGCCG AAGGCTTTGC GTTAGGGCGG
TTGCCACGCT GGTATACGCT AGCGATGCTG TTGCTCGATG ACACGCTCTA CATCATCACC
CTGCCGCTAG CGGTGTTGGG ATGGGCGGTG GTACGGCGGA CCAATACCGG CGGGCAATTA
CTGGACTTAA TCGGACTGTG GCTACTCTAT AATCTGGCTG CTGCCCCGCT GTTATTTGCG
ATCAACCGCT TTCGCACCCC CTTGCTCCCA TTCCTCTGTA TCTTGGCCGC ATTCGCGTGG
GCAGCGCTAC CACAGTGGCG ACAATGGTTC ATCAGCCGAC ACGCGCAACT GTACGCAGTG
TTGGCCATTG TCTTGTGGTT GGTCGCCGCT ACGCCGTATG CCTACCTTGA ACCTCGGTTA
CCGGACGCCC CCTCACGCTG GGCGTCGTAT TTTGGCCCGT ACCCATCGGC GATAGTAGCG
GCGCAGATCG CGTGGCAACG CCGTCCACAG TATGAAGCAG TAACCCGCTT GGAGGCAGCG
GTTGCTCACG ATGACCTGGC GGCGTGGACG CAAGCGCTGA CCGATCCGAT GGTGCCGACA
TATGCACGGG CCGTAGCCGA GCCGTTGTTG GCGGCTCGCC TTGGGCAGCC TGAGCGGGGA
TTGGAACTCT TAGATCGGCG TCAGCCACTC TATCCATGGC AAGCTGCGGT TATCCGCGGC
GAGTTATTGC GCCAGATGGG TGACTTGGCC GGCGCACGGC AGTGGCTCGG CCTGACTTTG
GTCGATGACT GGAACCCGAC GGGGTGGGCG TGGCGCTGGT TGCATCCACC CCGCTTGCCC
GGCGACCGGA TCGATCTGGC CGATGATAAC GATCTGGGCT ATATCGATGG TTTCTATCTT
GGTGAATACG ACCCGGTGCT CGGTGCGACG GTGCGGTGGG CGAGCGAGAC GAGCCGATTA
CGCTTTCCGG CAGCGGCTAC CGGTCAGTCA CGCCAACTTT GCTTACGCGC AGCGGCGAAC
TGGCCACTCG ATCTGCCGTT ACCAACTGTG CAGGTGATGA TGGGTGAGAC GCAGGTGGGT
GTGTTCACCC CCGACCGTTC ATTACAAGAG TATTGTCTGC CGCTACCGGC ATTGCCGCCC
GGTGACGAGT ACGTGATCAC GCTGCTCAGC CCCGGCTTTG TGCCCGATGC GCTCGATCTG
GTGCGTCGGC AAGGGCCGCA AGTGGGGCAG GTGCGGATTC TAGCTTTTCA GCTTGATTGG
GCCGAGGTGC GGTGA
 
Protein sequence
MRIFHDNRYT QHWPLLVAIL IGVILRVALW GNLPRLGLIS DEAEYLAAAD WLAHGRGFAW 
HTGYLWTRAP LYPLFLAAHI ALFGRDLAVI FVSQTVLSLL NVGLVYALAR RLGATPLVAG
GAAFLSAIAL PLAMYPQFLL SETLFISLLL IAFSFLADPQ RRQHVFIGGL FLGLATLTRG
LLLGFLPLAA LWIGWRAGGN RRERFIVALL PLLAAGILIG PWALYASRTY GGLIVIDTTG
AYNLALGGRT AYDGGRSDAP TRNFTLALLD PSLDDATRAT LIAGSCLAQT GDPRLSTALA
KPITAITQAE RQQLLSAEGW CLIRAKPAAF VVKTLIELVD LFQINFSGDE RLAEGFALGR
LPRWYTLAML LLDDTLYIIT LPLAVLGWAV VRRTNTGGQL LDLIGLWLLY NLAAAPLLFA
INRFRTPLLP FLCILAAFAW AALPQWRQWF ISRHAQLYAV LAIVLWLVAA TPYAYLEPRL
PDAPSRWASY FGPYPSAIVA AQIAWQRRPQ YEAVTRLEAA VAHDDLAAWT QALTDPMVPT
YARAVAEPLL AARLGQPERG LELLDRRQPL YPWQAAVIRG ELLRQMGDLA GARQWLGLTL
VDDWNPTGWA WRWLHPPRLP GDRIDLADDN DLGYIDGFYL GEYDPVLGAT VRWASETSRL
RFPAAATGQS RQLCLRAAAN WPLDLPLPTV QVMMGETQVG VFTPDRSLQE YCLPLPALPP
GDEYVITLLS PGFVPDALDL VRRQGPQVGQ VRILAFQLDW AEVR