Gene Cagg_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2827 
Symbol 
ID7267533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3470673 
End bp3472787 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content60% 
IMG OID643567648 
Productmembrane protein-like protein 
Protein accessionYP_002464125 
Protein GI219849692 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGGA GCTGGTCGGT GTTCTTTATC CTCAGCGGTT TGGCTGCGCT CGTTCTCCGT 
CTCTACCGGC TCGATGCCCA GAGCCTCTGG CTTGATGAAG GCAATAGTTG GGCCATGGCG
ATGCAGCCGT GGTCGGTACT GGTGCTTGAT CTGGTGCAAC CGAATGCGGC CTATCCACTC
TACCACCTCT TACTCAAGGC GTGGATGGCT GTAGCCGGGA CAAGCGAATG GGCATTACGG
CTGCCCTCGG CGCTGGCCGG TGCGCTTAGT GTGCCGCTGC TGGCGTTGGC TGCACGGGCA
GCGGCGCCCA CCGACCGGCG GCGCGCTATC GTCACCGTGG CGGCAACGCT GATCGGTATG
TGGTCGCCTT TTGCCCTATG GTACGCGCAA GAGGCAAAGG TCTATGCGCT CGTTTTGTTG
GTAAGCGCGG CAATGCTCTG GTTGACATTG CGTGCGGTGC AGCACGATCG GACGGCAGAT
TGGGGATGGC TGTTCGGGTT GGCGATTGTT GCCTTCTTCA TCCACCGGTT AACGGCACTA
CTGACCTTAA GTGCGGCACT GATATGGCTG TTCAGTCGGC CGCGCCGTTA CGCATGGCTC
ATCGCGGCCG GTCTACTGCT CATTGGGGTG GGGATGATTG CGGCAATGGC AGCCGGGATC
GGTAGTGACC GTGCCGCCAG CGGTGCGTCA ATTGCGGCCG ATCCGCTACG GGCGTTGTGG
CTGACCTTTA CCCGCTTTAG CCTCGACCGT TGGCCGGGCG ACGTGCCGTG GGTGTGGTGC
GTTCCGTGGC TGGTGCTGAT GGTCTTGGGC TTGATCGTGG TACGTACTGT CTCGCAGCGG
ACGGCACCGG TCTTGGGGAT AATGGGCGGG GTACCGTTGT TGCTCTTCTC ACTTCAGTTG
GTATTCACCC GTCTCTACGA AGCGCGCTAC CTGATGATCA TCTTTCCGGT GTGGGTGGTG
GTGTTGGCGT TAGGGTTGGC TCCACAGCGT GGTGGTTCGG GTTGGCGGTC AGCGACGGTA
ATCGGGTCAT TGGCTCTCAG TGGGGTGCTG ATCACCGGTG GCTTGTCACT CTTTCAGCCG
CGGTTCGGTC TCTTCTCAGG CGACCCGGTC AAAGAACAGT ACCGTGAAGC CATCACCGAA
TTGGCCCGTC GGCTCCATCC CGACGATGCA GTCGTCGTCC ATCCCGGCTA TCTACGACCG
TTGTACGACT ACTACATGGC GCGCTTGAGT GCCGATCCTG CCCCGTCACC CCTGACATTC
GCCAATTTCT GGATGGGCGA GACCGGCTAT AGTCAGCGTG ACTGGGATGC CGAGCGGCGG
GTGGCGTTAG CCGGCTATAC ACGCAGCTTT TTGGTGATTG CGCCGAACCA TGCTCGCACT
GTTGATCCGC CGTTGCCCGG CGATGAGTAC GGACTCGTCG GCAATTTCTG GGCTTTTAGC
CGTGAACAGC GGACATGGCC GTGTGGGATT TGGCGTTTTC AAGGTGTACA CCTCTTCTGT
CAGGAAGCGC CGGAAGCCTA CATCACCGGT GCGATAATTG AGCCGGTCAC GCCCGTGACG
GCGACATTTG GCGATGATCT TATGTTGTTG GGGTATACGC TGAAGGCGAC CACACCGGCC
GGGCCGGGGG TATACCGCGC TGGCGGCAAC ATCCCGTTGA GTCTGTTTTG GGATGTTCGC
CGTCCGTTGG CGGAAGACTA CAGTCTGTTT ATTCACCTCT GCCGTGATTG CGAACAGCCG
CCGGTAGCGG GTGATGATGG GCAACCATTG GCCGGCTACC TACCGACGAG CACATGGTTG
CCGGGCAAGC CGGCTCGTGA CGACCGCGCC ATTCATATAC CGCACGATCT GCCGCCGGGT
GAGTATCAGC TTCTGATCGG CTGGTACCGA CCAACCGATC CATCACCGGA AGGACGTTTG
CCGGTACGCG GTGAGGGTGC GCTGGGGGCG GGTCGTCTTT GGTTGGCAAC CATTGAGATT
ATCGGCGATG ATGAGGGGCG GCGGGGTGAT ACCGACGCGC TTGCCCGGAC TTCCCTATCG
CAGCTCGGAT CTCCATCTCG GTACAAGATA GTTGTAGACG TGTGGCATCA TCAACGTGCG
TATCTTTCAC GATAA
 
Protein sequence
MRWSWSVFFI LSGLAALVLR LYRLDAQSLW LDEGNSWAMA MQPWSVLVLD LVQPNAAYPL 
YHLLLKAWMA VAGTSEWALR LPSALAGALS VPLLALAARA AAPTDRRRAI VTVAATLIGM
WSPFALWYAQ EAKVYALVLL VSAAMLWLTL RAVQHDRTAD WGWLFGLAIV AFFIHRLTAL
LTLSAALIWL FSRPRRYAWL IAAGLLLIGV GMIAAMAAGI GSDRAASGAS IAADPLRALW
LTFTRFSLDR WPGDVPWVWC VPWLVLMVLG LIVVRTVSQR TAPVLGIMGG VPLLLFSLQL
VFTRLYEARY LMIIFPVWVV VLALGLAPQR GGSGWRSATV IGSLALSGVL ITGGLSLFQP
RFGLFSGDPV KEQYREAITE LARRLHPDDA VVVHPGYLRP LYDYYMARLS ADPAPSPLTF
ANFWMGETGY SQRDWDAERR VALAGYTRSF LVIAPNHART VDPPLPGDEY GLVGNFWAFS
REQRTWPCGI WRFQGVHLFC QEAPEAYITG AIIEPVTPVT ATFGDDLMLL GYTLKATTPA
GPGVYRAGGN IPLSLFWDVR RPLAEDYSLF IHLCRDCEQP PVAGDDGQPL AGYLPTSTWL
PGKPARDDRA IHIPHDLPPG EYQLLIGWYR PTDPSPEGRL PVRGEGALGA GRLWLATIEI
IGDDEGRRGD TDALARTSLS QLGSPSRYKI VVDVWHHQRA YLSR