Gene Cagg_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2820 
Symbol 
ID7267526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3461894 
End bp3463531 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content56% 
IMG OID643567641 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_002464118 
Protein GI219849685 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.771324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGC TTGCAATTAA CCAACGCCAA CTGGAAACGC TGAGTCAGCT CCTGATTGCC 
GGCGGACACC ACGAAGTGCC CGATCTGCTC CAGGCGTCGC TCGACCGCTT GATTGCATTC
TGGCCGGCCC AAGCCGGTGC CTTGCTTTAT ATCTCTCCCT ACGGTGAGAC GATTAAGGTC
ACACGTGGTC AGCTCGACGC CGAAACGAAT TCGCTGATCG AACAGGCACG TGAAGGGTTT
GCCCGGCGTG ATGATAACGG TGAACCCATT GTTGGTTCCT ACTCGATTGA CGATAGTCGC
GATCTGATCG AGTTGCCATT GCAAAGCGGT GGTCAGGGGG TTGGGCTGCT CCATCTGGTG
GTGAGTCGCA CCGATCAACA ATCCGGCAAC CAACAGCCAC TCGACGAAGA ACTCCTCGTG
CTGCTGGTGC GCGCCATCGG TGGCGAAGCC GATAAGATTG CGATGTTGCG GCGTGCCGAG
CGCGATCTGC GGGAACTGCA TTTACTCTAC GAAATCGGTC AGTTGCTTGC CGTGAACCTC
GATCTGACCA GCCTGCTCAA CGATATTAAA CTGCGGGCGC CGAAAGTGGT CGGTGCCGAA
CGATGCTCGA TCTTTATTCT CGATGAAGAG ACCAACGAGC TGGTGCTAGA AATACCCGGT
GAGCAGCGCC GGTATCGCAT GCCGGCCGAT CGCGGGATCG CCGGCTGGGT CGTGACTCAT
GGGGTTGGGC AGATTGTCAA CGATGTCGAG CACGATCCGC GCTGGTATGA TGCGATCAGC
CGCGAAGCCG ACTTTGTGAC CCGTTCCATC GTGTGTGTGC CGATGCGGGT GAAAGATCGG
ATCATCGGCG CAATGCAGTT GCTCAACAAA ATCGATGGTC AGCCGTTTAA CGAGCAGGAT
TTACAACTGC TCACTACACT TGCTGCCCAA GCGGCTATTG CCATCGAAAA TGCACGCCTG
TACCAACGGT TAAAGGAAGA ACGTGACCGG TTACTGCAAA AAGAAGCCGA GGTACGGCAC
GCAATCGCTC GCGATCTCCA CGATGGCCCG ACTCAGAGCA TTGCCGCAAT TGCGATGAAT
ATCGAGTTTA TTAAGCGTCT GTTTAAGGCA ATGCCGGAAC GTGTCCCCGC CGAACTCGAT
ACGCTCGCCG AGTTAGTTCA AAAGACAACC CACGATATTC GTAACTTGCT CTTTGAGTTG
CGACCGCTTG GCCTCGAAAC ACAAGGTTTG TTAGTAACCC TCCAACAGTA CGTTGAACGT
TGGCGTGATC CCTCGGGTCA CGATACGAAA CTGCGGCTCG AGGCACCGGC CCACGTGCCA
CGGCTACCTC CCGAAATTGA AGGCGCCATC TTTATCATTT TGCAGGAAGC TATTAATAAC
GCCCGCAAGC ACGCGCGCAG CGATTCGATC ACGATTTATT TGTATGTCGA AGAGGACCAT
CTTGTGGCGA GTGTGCGTGA CCGTGGTTGC GGATTTAACG TCGCTGCAGT GGAGAGTGGC
TATACCAACC GTGGTAGCCT CGGTCTGCTC AACATGAAAG AGCGTGCCCG CCTCATCGGC
GCCGATCTCC GCATTCGGAG CGAGATTGGG CAAGGAACGA CGGTAGAGCT GCGGATCCCG
CTCAATCATA CTCAGTAA
 
Protein sequence
MPPLAINQRQ LETLSQLLIA GGHHEVPDLL QASLDRLIAF WPAQAGALLY ISPYGETIKV 
TRGQLDAETN SLIEQAREGF ARRDDNGEPI VGSYSIDDSR DLIELPLQSG GQGVGLLHLV
VSRTDQQSGN QQPLDEELLV LLVRAIGGEA DKIAMLRRAE RDLRELHLLY EIGQLLAVNL
DLTSLLNDIK LRAPKVVGAE RCSIFILDEE TNELVLEIPG EQRRYRMPAD RGIAGWVVTH
GVGQIVNDVE HDPRWYDAIS READFVTRSI VCVPMRVKDR IIGAMQLLNK IDGQPFNEQD
LQLLTTLAAQ AAIAIENARL YQRLKEERDR LLQKEAEVRH AIARDLHDGP TQSIAAIAMN
IEFIKRLFKA MPERVPAELD TLAELVQKTT HDIRNLLFEL RPLGLETQGL LVTLQQYVER
WRDPSGHDTK LRLEAPAHVP RLPPEIEGAI FIILQEAINN ARKHARSDSI TIYLYVEEDH
LVASVRDRGC GFNVAAVESG YTNRGSLGLL NMKERARLIG ADLRIRSEIG QGTTVELRIP
LNHTQ