Gene Cagg_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2790 
Symbol 
ID7269860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3428625 
End bp3429806 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content57% 
IMG OID643567611 
Producthelix-turn-helix domain protein 
Protein accessionYP_002464089 
Protein GI219849656 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.783266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACC AACGTTTACG CCAGCTCCGA CTGGCACGTG GAATGACGCT CGACGATCTG 
GCACAGGCAA CCAACCGCAT CGTCACTCGG CAAGCCATCT CGAAATACGA ACACGGTCAG
GCGCAACCAT CACCCATCGT CTTACAACGG CTCGCCCAAG CCCTTGGTGT GCGACCGACC
GATCTCCTCG ATAGTACTAA CACTCAGATC GAGCTGATTG CCTACCGCAA ACGGGCCACA
CTGAGCAAAC GATATCACGA TCACATTACA GCACTGGCGA CCGAACAGTT GCGCGCACGA
CTGCGGCTCC AGCGCCTCAT TGGCGAACCG ATTCGGTTAG ATGTTCCCAT CTATGGCTAC
CCAATCGATC AACTCGAAGC TGCCGAAGCT GCTGCTGATG ATCTACGGGT GCGGTGGGAT
CTGGGCAAAA CGCCACTGGT CAATCTCACC GACACACTGG AAGATCACGG CTTGCATGTC
ATCGCCCTCG ATGCGGACAA CGGCTTCGAC GGCGTTGCGG CCATCGCCCG CGATGAACAC
GGTGAGCCAC TGGCGGCTGC GGTGATCGGT CGGCGCAGCC GCGATGGAGC ACGCTGGCGA
ATGAACCTGG CCCACGAGCT AGGTCACTTA GTCTTGCAGC CAACCAGTCA ACTTGACGAG
GAAAAAGCGG CATTTCGCTT TGCATCAGCA TTTCTCGCTC CGGCAACAAC GCTCCGTACT
CATGTAGGAG AACATCGCCA TCACCTTCAT CTCGGTGAAC TCCTGTTGCT CAAGCGCCAT
TTCGGTATGA GTATCCAGGC ATTGCTCTAC CGGATGCAGA CGTTGGGTAT TATCAATCAG
CGTCTCTACC GGTCGTGGAT GGTCAAGATC GGTGAGCAGG GTTGGCGCAC CAACGAGCCA
GAACCCTTGC CGATGGAAGA ACCGCTCTGG TTGCGTCGAA CTGTGTTGCG AGCAGTAGCC
GAGGAATTGA TCGATCCGAC AGAGGCGCAA GCCCTTCTCG GCGAATCGAT CGATCTCTTG
GCCGAATCGA GCCGGCAGGA CAGCCTGTGT CACCGTTTGC TCCGCCAACC GCTGGCCGAA
CGCCATGCTG TTCTCGCTGC CCAAGCGGCG CAAATGGTCG ATCTCTATCA AACTTCTCCC
AATGTAGCCA ACGAGGTCGA AGCAAGTGAG CATTCCCAGT AA
 
Protein sequence
MINQRLRQLR LARGMTLDDL AQATNRIVTR QAISKYEHGQ AQPSPIVLQR LAQALGVRPT 
DLLDSTNTQI ELIAYRKRAT LSKRYHDHIT ALATEQLRAR LRLQRLIGEP IRLDVPIYGY
PIDQLEAAEA AADDLRVRWD LGKTPLVNLT DTLEDHGLHV IALDADNGFD GVAAIARDEH
GEPLAAAVIG RRSRDGARWR MNLAHELGHL VLQPTSQLDE EKAAFRFASA FLAPATTLRT
HVGEHRHHLH LGELLLLKRH FGMSIQALLY RMQTLGIINQ RLYRSWMVKI GEQGWRTNEP
EPLPMEEPLW LRRTVLRAVA EELIDPTEAQ ALLGESIDLL AESSRQDSLC HRLLRQPLAE
RHAVLAAQAA QMVDLYQTSP NVANEVEASE HSQ