Gene Cagg_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2780 
Symbol 
ID7269850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3417025 
End bp3418290 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content58% 
IMG OID643567601 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002464079 
Protein GI219849646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACG ATCATCGTTA TTTATTGACC ATTGGCCTGT TAACCACCGG TCTGACGGTG 
GGCTGGTTGT TTGCGACTAT TGCCTATGCC GAACTTGGGT ATGGCACTTA CCGACTAAGA
GTACCACTAT TCGGTGACTT GACGCTGATC GGTCTCCTCA ACAGCGCGCC GATATTGGCC
GGTGGTATCT GCGGGCCGGT GGTATGGCAA TCCGTGCGAC GGTGGGGAGC ACGTCAGACG
TTGATCCTCG GATGCTTAGC ACACGGTGCG GCCCTGCTGA CTCTGGCGTT GTCTCCTCAC
AGCGAAGACC TCACCCCGCT GACCGCATGG ACGTTGGTCG GTGGGATTGC CCTTAGTGGG
CCGGCCAGCG TGCTGGTTAA TCTGGCCGGA CCATCGCTCA TGATGCAATT AAGCAGCACG
TCCGGCCCTG ACCGACTTTT TTCCCGCAGC GCCGCCTTGA GCTTGATCAC CGGCGGTATC
GCTAATCTGG TCGCCGGCAG TTTAGCAATG GTATGGCGCA TAGTGATCGT CGAGAGCGAT
GCCATCGCGC CGTACCGGTT CAACGCTACG TTCAGCGCAG TGATCGTTGC GCTTGCCGGG
CTACCTCTGC TAGGACTCCA CCTCACCGGA TCACAGCCAC TGCCTCCGAC TACAACTATA
CGTCGTGAGC TGAGAGAACT CTGGCCTACC CTCGCCAAGG CCATCATCTT CGTACCCGGA
CCACTCCTCA TTTCGTTCGG TGCTGCTCTC TTCATCCCGT ACCTTAGCCT CTTCTTTCGT
CAACGATTCA CCGCCACCGA CGCCATCATT GGGCTATTGT TCGCGCTCAT CAGCCTCGCC
ACCGGTCTGG CCACACTAGT CGGACCAAGA CTCTCGGCAC GGATTGGTCG CATGCAGGGG
GTTGTCCTCA CCCAAGCCCT TGCCATCCCC TGTCTGATCG CGTTAGCATT TGCCCCCGCC
CTCCCGATAG CAGCGTTGAT CGCAATGCTA CGCAGCGCAC TTATGAATAT GGCAACGCCC
CTCTTCGAGG CCCACGCCCT GAGCCAAACC CCACCAGAAC ATCACCCTAC CGTCATCGGT
CTTATCCGAG CGGCGGCTTC GGTCGGCTAC ATTGCCGGCC CCACCATCAG CGCCGAACTC
CAAAGCAGCG CCGGCTTTAC CCCAATCTTG CTTATCGCGG CACTGTGCTA TACGGTGGCT
GTAATAGTCA ATGCAACCCT CTTTGTCTGG CACGCACCAT CTCCTCAGCG CAATACCACA
CCTTAG
 
Protein sequence
MRNDHRYLLT IGLLTTGLTV GWLFATIAYA ELGYGTYRLR VPLFGDLTLI GLLNSAPILA 
GGICGPVVWQ SVRRWGARQT LILGCLAHGA ALLTLALSPH SEDLTPLTAW TLVGGIALSG
PASVLVNLAG PSLMMQLSST SGPDRLFSRS AALSLITGGI ANLVAGSLAM VWRIVIVESD
AIAPYRFNAT FSAVIVALAG LPLLGLHLTG SQPLPPTTTI RRELRELWPT LAKAIIFVPG
PLLISFGAAL FIPYLSLFFR QRFTATDAII GLLFALISLA TGLATLVGPR LSARIGRMQG
VVLTQALAIP CLIALAFAPA LPIAALIAML RSALMNMATP LFEAHALSQT PPEHHPTVIG
LIRAAASVGY IAGPTISAEL QSSAGFTPIL LIAALCYTVA VIVNATLFVW HAPSPQRNTT
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