Gene Cagg_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2753 
Symbol 
ID7269823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3376835 
End bp3378028 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content59% 
IMG OID643567574 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002464052 
Protein GI219849619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CAACCGCTGC GGCTACTCGC CGTTGGCTGA TCCCGTTGTA CATCGCCGGT 
GTGATCGTCT TCTCCGACAT GTACCTGACG CAGCCTATCT TGCCCCAGTT GTCGGCTGAA
TACGGTATTG CACCGGCCAC CGCCGGCCTC AGTGTATCGG TGGTGGTGTT GATGATTGCG
CTTGGGTCGC TGGCCGTCGG TCCGCTGAGT GATCGCTGGG GACGCTGGCC GGTGATGGTC
GGGAGTGTCC TCGTGCTTAG TCTCCCGACA TTGCTCTGTG CATTAGCACC GTCGTTTGGG
ATGTTGCTGG TGGGGCGTGC CCTCCAAGGC TTATGCATCC CCGGTTTGAC GGCAGTAGCA
GTGGCCTATC TTGGCGATCG CTTACCTACC GCTGAGTTAG GTCGTGCGGT TGGGAGTTGG
ATTGCGGCGA ACGTGGCCGG CGGATTGAGT GGTCGGGTTG TGGGCGGTCT GATCAGCGAT
AGTTGGGGGT GGCGGGCCAG TTTTATCGTC TTTGCCGGGC TAACGTTGGC GGCTGGGTTC
GGTCTCTGGC TACGTTTACC GCGTGATCGT CCTGTGGCCG GTGGTGGGTG GGGGCAAGCC
TATTGGGCAA TGGTGATGCA TCTCGCCGAT CGTCATCTGC GCAGTGCGTA TCTGATCGCC
GGGTCACTAT TTTTCGGCTT TCTCGGCATC TTCACCTATC TGCCGTACTA CCTCAGCGCA
CCACCCTTTA CCCTCCCATC GGCTATCGTC GCACTGGCCT ACGTAAGTTA TTTGGCCGGA
GTGATCGTCT CCCCATGGGC GGGGGTACTC TCGGCTCGTT ATGCCCGCTC GCGTCTAATC
ACCATCGGGT TGCTCATCGC TATGGGTGGC ATTGGATTAA CCCTTTTCCC GCACCTGCCG
TTAATTGCGC TTGGCTTATG GACGTTGTGT AGCGGGATGT TTATAGCCCA AGGTGTGGCC
CCGGCCCTGG TGAATCAATT AGCCCAACAC GCGAAAGGCG CGGCGAGTGC GCTGTACCTG
GTTGCCTATT ATCTCGGTGG AACCCTCGGT GGGGTAATTC CCGGCCTTGG CTGGCAGATC
GCCGGTTGGC CGGGAGTTAC GATTATCTGC CTGAGCGCCT TAGCACTCGC TTTGGTGGCG
ACACACCGGT TGGCGATGTT TGAATTGCAC CGACATCATC GTTCAGCGGC ATAA
 
Protein sequence
MTIATAAATR RWLIPLYIAG VIVFSDMYLT QPILPQLSAE YGIAPATAGL SVSVVVLMIA 
LGSLAVGPLS DRWGRWPVMV GSVLVLSLPT LLCALAPSFG MLLVGRALQG LCIPGLTAVA
VAYLGDRLPT AELGRAVGSW IAANVAGGLS GRVVGGLISD SWGWRASFIV FAGLTLAAGF
GLWLRLPRDR PVAGGGWGQA YWAMVMHLAD RHLRSAYLIA GSLFFGFLGI FTYLPYYLSA
PPFTLPSAIV ALAYVSYLAG VIVSPWAGVL SARYARSRLI TIGLLIAMGG IGLTLFPHLP
LIALGLWTLC SGMFIAQGVA PALVNQLAQH AKGAASALYL VAYYLGGTLG GVIPGLGWQI
AGWPGVTIIC LSALALALVA THRLAMFELH RHHRSAA