Gene Cagg_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2733 
Symbol 
ID7269804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3357421 
End bp3358470 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID643567556 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002464034 
Protein GI219849601 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.546218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC GTTTCATGCT ATTCCTTACC CTGATCATCT TCATTATCAC CGCATGCAGC 
GCACCGGCTC CGGCGCCGAC GGCGGCCCCC ACAACCGCGC CGGCGGCCAA TCCACAGCCG
GAGTTGCGCA CAGTGACGCT GGCGATGTCG TACATTCCGA ACATTCAGTT TGCGCCTTAC
TATGTCGCGG CGGCGAAGGG CTACTACGCC GCCGAAGGGA TTGAGGTCAA TTTCGACTAC
AACTTCGAGA ATGACGTGCT CCAGCGCGCA GCGACGTGGC CGGCCAGTGG TGTTGCTTTT
GCGACGACCA GCGGTACTTC GGTATTGCTC GCTCGCCAGC AGGGGGTGCC GGTCAAGACA
GTGATGACGC TCTACCAGCG CTTCCCAATC GCGTTTTTTG CCAAGGCGAA CGTGCCGCTG
GCGAGCGTCA ACGACCTGCG CGGGCAGACC ATCGGTATCC CCGGACGCTT CGGCGAGAGT
TTCTATGCGC TGTTGGCGGC GCTCTATGCC GGCGGTATGA CCGAGGCCGA TGTGACGGTA
CAAGAGATCG GGTTTACGCA GGCGGCGGCG GTGATGGAGG ACAAGGTGCC GGTGGCGATT
GGCTACGCGA TGAACGAGCC GGTGCAATTG CGCGAGCAAG GGGTGGAGGT GAATGTGTTG
CTGGCCGCCG ACGTCTTTAA TCTCGCTGCT AACGGCATCG CCGTCAGTGA GGCGCTGATT
GCGCAAGAGC CGGAACTGGT GCGGAAGTTT GTGCGGGCCA GTTTGCGCGG GTTGGCCGAT
ACGCTGGCTA ATCCGGCTGA GGCGTTCGAT CTGAGTCTGC AATTCATCCC CGAAGCGCAG
CTCGGCAATC TCGACTTGCA GCGGAAAGTG TTGGCAGAGA GCTTACCCTT CTGGCAGAAC
GAGCTGACGG CGCAACATGG GTTGGGTTAC ACTGACGGCC AACTGTGGGC GCGCACCGAG
CAGTTTATGC GCGAGGCAGG TTTGCTGGCC GGGCCGGTGG AGGTGGAGAA GGCCTATACC
AATGAGTTTG TGCCGGGCGG TTCGTATTAA
 
Protein sequence
MKLRFMLFLT LIIFIITACS APAPAPTAAP TTAPAANPQP ELRTVTLAMS YIPNIQFAPY 
YVAAAKGYYA AEGIEVNFDY NFENDVLQRA ATWPASGVAF ATTSGTSVLL ARQQGVPVKT
VMTLYQRFPI AFFAKANVPL ASVNDLRGQT IGIPGRFGES FYALLAALYA GGMTEADVTV
QEIGFTQAAA VMEDKVPVAI GYAMNEPVQL REQGVEVNVL LAADVFNLAA NGIAVSEALI
AQEPELVRKF VRASLRGLAD TLANPAEAFD LSLQFIPEAQ LGNLDLQRKV LAESLPFWQN
ELTAQHGLGY TDGQLWARTE QFMREAGLLA GPVEVEKAYT NEFVPGGSY