Gene Cagg_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2729 
Symbol 
ID7269800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3351877 
End bp3354267 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content59% 
IMG OID643567552 
Productprotein of unknown function DUF214 
Protein accessionYP_002464030 
Protein GI219849597 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACTC CGCGTTGGCG AAAAGTTATC CGCGACTTGC GCGTCTTCCC AACCCGCACC 
GCACTGGTGA CGCTCTCGAT TGCGGTTGGT GTTTTTGCCT TTGGTGTGAT CCTCACAGCC
CGTGCCGTCA TTGGCCGTGA GCTACAACGG AGTTTTGAGG CAATCAATCC GGTAAGCGCA
ATTATCACGA CCACCACATT TGATACCGAT CTTGCCGAGA CAGTCGAACG GTTACCCGAA
GTTGCCGTCG CCGAAGGCCG TCGCGTTGTG CCGGCCCGCA TTCGCATCGG CCCCGATCGG
TGGGAAGATG CGCTGATTAC CCTCCTGCCC GACGATGGCA TCCGCCGGAT TGGCATTGTC
CGCCCCCAAG TGGGGGCATG GCCGCCACGC GAACGGGCAA TATTGGTGGA GCGGGCGTCG
CTGGCGCGTG CTGGCTTGGC GATTGGCGAG ACGGTCGTAG TTGAGTTGCC GGGGATCGGT
GAGCGCGCGA TGCCGGTGGC CGGCACGATC CACGATCTGA GCACGCCGCT GGCTGTGCTC
ACTGCGCAGA CGTTCATCTA TATGACTGAA GACACGCTGC GCTGGTTGGG TGGCCCGACC
GGTTATAACC AGTTGCACCT GATCGTCAAT GGTGACCGGC GTGACGTGAC CAAGATACGG
GCGATGGCGA GCGTGGTTGA GCAGTTGCTT GAGCGGAGCG GCCATCCGGT GATCCAGACC
TACGTGCCGC CGCCGATGCA ACACCCTGCT GAGGCGCTTT TACCGGTGAT AACCGTCTTG
ATGTTCATCG TCGGCGTGTT GGCGCTTGTT GCCAGCAGTT TTCTCAGCAT CAACACGATC
AGTGCCATTC TCAATCAGCA AACGCGCCAG TTGGGGATTA TGGCGGCCAT CGGTGCCGGG
CCAAAAACGT TAGCCACGAT GTACATGGCG ACCGCAGCGT TATTTGGGTT ACTGGCATTG
GTGTTAGCGG TACCGGCGGG ATTGCTCGCA TCACAGGGCC TTGCCGGTTT TTTGGCCGGA
CAGTTGAATA TCGATCTGCC ATGGCCGGTT TGGAGTGGTG AGATTTTGCT GTTGCAGATC
GTGGCCGGGA TCACGGTGCC GGTGTTGACC GCGTTGTGGC CGATTCGTAG CGCCTTGCGC
CGGCCCGTGC GCGAGTTGCT CAGCGGCGAA ACCGCACCGC CGCCGCCACC GGTAGTGATA
ACCCTGCTGA CCCGCATACT CGGCCGATTC CTCCGTCGGC CAACACTCTT GGCCCTCCGC
AATGCGTTTC GCCAACGCGC CCGTTTGTTG CGCACACTGC TGGCGCTAGC GCTAGGGGGC
AGTGTGTTGA TTACAGTGAT GACTCAGCGC ACTTCGCTGT TTGCGACTCT TGAGGCCAGT
CTGGCGGGAC TGAACTACGA TCTCGAAGTG CAGTTGGCCC ATTCCTACCG GATCGAGCGG
ATTGCGCCGC TGATCGCTTC CTTGCCGGCA GTGACCCGCA TCGAGAGTAC GCTGCGCGCG
CCGGCTTTTC CGGTACGGCC CGATGGTACC GATGGCGAAG AATTGGCGTT GCGCGCCTTG
CCTGCCGATA CCGATTTCTT CCATCCGCGC CTCGCCGAAG GGCGCTGGCT GGCCGGCCCC
GGTGTACGTG AGGTTGTCTT TTCGACCAAT ATTCGCAGTA AAGAGCCGTA TTTACGCATC
GGTGATTGGG TAACTCTCTC GATTGAAGGT TGCGAGTCGC AATGGCGCCT GGTGGGTCTG
ATTGAAGTTT TCACCCCGCC GACCATGCCG GCGCAGGCGT ATGTTGACAT ATCCGCCTTC
ACTGACGAGC AGGGTGGTGT TGGTCGGACT GATACAGTAC GGGTGGCGAC TATCGGCCAT
GATCCGGCCA GTCATGCTGC CGCAGCCGCC GCTATTGAAC AGCAACTCAC TGCTTACGGC
ATCGATCTAC GCCTCATCCG TACTATGAGC GAAGAGCGAC GGATTCTCGA AGAGCGGTTT
AATCTGGCGA CCGGCGCGAT CTCGATCATG GCACTGATTA TTGGGACGGT TGGTGCGCTT
GGTTTGACCG GTACGCTCAG TATCAATGTA CTCGAACGGA CCCGTGAGAT AGGCATTCTG
CGCGCGATTG GCGCCAGTGA TGATGCCATC CGTGAACTGG TAGTCACTGA AGGACTAACG
ATTGCGCTGT TGGCATGGGT GGGTGGAGTG ATCCTCTCGA TCCCGATGAG CTATGCGCTG
GCCTACAACT TTGGTATGGC GTTGCTCAAT ATTCCGCTGA TTTGGGTCTA CTCTTTCCCG
GCGATTTGGA TGTGGTTGGG GGTGGTGATT CTGTTTGCAT TGGTATCGAG CGTGTTGCCG
GCGCGTGCCG CGACTCGCAT CGCGGTGCGC GAGGCGCTGG CGTATGAGTG A
 
Protein sequence
MLTPRWRKVI RDLRVFPTRT ALVTLSIAVG VFAFGVILTA RAVIGRELQR SFEAINPVSA 
IITTTTFDTD LAETVERLPE VAVAEGRRVV PARIRIGPDR WEDALITLLP DDGIRRIGIV
RPQVGAWPPR ERAILVERAS LARAGLAIGE TVVVELPGIG ERAMPVAGTI HDLSTPLAVL
TAQTFIYMTE DTLRWLGGPT GYNQLHLIVN GDRRDVTKIR AMASVVEQLL ERSGHPVIQT
YVPPPMQHPA EALLPVITVL MFIVGVLALV ASSFLSINTI SAILNQQTRQ LGIMAAIGAG
PKTLATMYMA TAALFGLLAL VLAVPAGLLA SQGLAGFLAG QLNIDLPWPV WSGEILLLQI
VAGITVPVLT ALWPIRSALR RPVRELLSGE TAPPPPPVVI TLLTRILGRF LRRPTLLALR
NAFRQRARLL RTLLALALGG SVLITVMTQR TSLFATLEAS LAGLNYDLEV QLAHSYRIER
IAPLIASLPA VTRIESTLRA PAFPVRPDGT DGEELALRAL PADTDFFHPR LAEGRWLAGP
GVREVVFSTN IRSKEPYLRI GDWVTLSIEG CESQWRLVGL IEVFTPPTMP AQAYVDISAF
TDEQGGVGRT DTVRVATIGH DPASHAAAAA AIEQQLTAYG IDLRLIRTMS EERRILEERF
NLATGAISIM ALIIGTVGAL GLTGTLSINV LERTREIGIL RAIGASDDAI RELVVTEGLT
IALLAWVGGV ILSIPMSYAL AYNFGMALLN IPLIWVYSFP AIWMWLGVVI LFALVSSVLP
ARAATRIAVR EALAYE