| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2707 |
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| Symbol | rpoB |
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| ID | 7269614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3318146 |
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| End bp | 3321829 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643567533 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002464011 |
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| Protein GI | 219849578 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.608751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGT TGATTGAGAG CGTGGTCCTT CAGCCGCTGA TCGCCCCGAT CGACCCGGGC
TTCGACGGTC GCCGGTCGCG CCGGATCGAA CGCCGCTCGT TCGCACGCAT CAAAGATGCG
ATTGATCTAC CGTTGCTGAT CGAAACCCAA CTCAAGAGTT TTGAATGGTT CAAACGTGAG
GGGCTGCGCG AACTCTTCGA CGAGATTTCG CCAATTACCG ATTTTACCGG TAAGAACCTC
GAACTACACT TTCGTGAATA TACCTTCGGT GAACCCCGTT ATGACGAGTT CGAATGCCGC
GATCGTGACC TAACCTATGC AGCCCCGCTA CGGGTGAAGG TCGAATTGCG TATTCTCACC
ACCGGTGAGA TTAAGGAATC GGAGATCTTC CTTGGTGATT TTCCGATGAT GACCGATAAC
GGCACCTTCG TTTACAACGG CGCCGAACGA GTGGTCGTCT CACAATTGAT CCGCTCACCG
GGGGTCTATT TTAAAGATGA AAAGGATCCA ACCAGCGGTC GTGCCCTTCA TACCGCCAAG
CTGATCCCTA ACCGCGGTGC ATGGCTTGAG TTCGAGACCA ACAAGCGCGA TGTGATCAGC
GTCAAAGTTG ATCGCAAGCG TAAGATTCCG GTCACCATCT TGCTCCGCGC CATTAGCGCC
TGGATCGCCA ACGAAGATGG TAGCGGACGC TGGGCACCCG ATAACGAACT CGATAAGTAC
GGTCACAATG AGCATCTTAT CGAATTGTTC CGCCACGTCG ATACGGTGGC CGAACATCTA
TACATCCAGG CGACGATTGA TAAGGACCCG TCGCACAATG CGAAAGAGGC ATTGCTTGAG
CTGTACAAGC GGTTGCGTCC CGGTGACCCG CCGACACTTG AGAACGCGCG CACGCTGATC
GAATCGTTGC TCTTTAACCC GCGACGGTAC GATCTGGCGA AAGTGGGCCG CTACAAGCTC
AACAAGAACC TCTGGGAGCG CGATGCCCGC CGTGATGGTC CCAAAGCACC CGATCTCAGT
GTTCGCGTGC TCCTACCTCG CGATATTTTC CGTATCGTAG AGCAAATGAT TTTGCTCAAC
AACGGCTACG GTCGCCCTGA TGACATCGAC CATCTTGGGA ACCGCCGCGT GCGTACCGTC
GGTGAGTTGA TCCAGCAACA ATTCCGCGTT GGTCTACTCC GCCTCGAACG GGTAGTGAAA
GAGCGGATGT CACTCCAAGA CCCGGCCAGC GCTACACCCA ACGGTCTGAT TAACATCCGA
CCCGTAGTTG CGGCGATGCG CGAATTCTTT GGTGGTTCGC AGTTGAGCCA GTTTATGGAT
CAGACCAATC CGCTCGCCGA GTTGACCAAT AAGCGCCGTC TGTCAGCGCT TGGTCCCGGT
GGTCTCTCGC GTGACCGCGC CGGCTTTGAA GTGCGCGACG TGCATCACTC GCACTATGGC
CGCATCTGTC CGGTGGAAAC ACCGGAAGGC CCGAACATCG GCTTGATCGG TACGATGTCG
ACTTTCGCCC GCGTTAATGA GATGGGCTTT CTCGAAACAC CGTATCGCAA GGTGTATAAC
AGCATCGATA ACGCCCAAGT GTGGCGCGAA AAAGGCATTT TACTGCGGGA CGTGCGCGAT
CTCCGCACCG GTGATCTGAT CGCTGCCAAG GGTACTCGTG TCGACGACCA GATTGCCCGC
CAGATTACGA TTGGCTTGCT GCGCGGTCAG ATTCTCCGTG AGGATGTTGT CGATCCCAAC
ACCGGTGAAT TAATCGCCGA GGCCGGTACC GAAATTAACC GCGCCCTCGC CGAACGGATT
GTGAACCTGC CGATGAAGCA GATTAAGATC CGTCCGGTCG TGTCGCAAGA GGTTGATTAC
CTGAGTGCCG ATGAAGAAGA TCGCTTCGTC ATCGTGCAGG CCAATGCACC GCTCGATGAA
CATAACCGCT TCCTCGATAC AACCGTCTCG TGTCGCTTCG GTGAGGATTT CGTGACCGAA
CGGGTTGAGC GAGTTGATTA CATGGACGTA TCACCCAAAC AAGTGGTGAG TGTCTCGACC
TCGCTGATCC CCTTCCTTGA GCACGACGAC GCAAACCGGG CGCTGATGGG GTCGAACATG
CAACGGCAAG CTGTGCCGCT ACTCCGCCCT GATGCGCCGA TTGTCGGCAC CGGGATGGAG
TATCGCACTG CTCGCGATAG TGGCCAAGTG GTGGTGGCCC GCCGCGATGG CGTGGTAGTG
AGCGCGACCG GCAATCGCAT CATCGTCGAG GAAGATGACG GCAAGCGGAC AGAGTATCGC
CTGCGTAAGT TTATGCGCAG TAACCAAGAT ACCTGTATCA ACCAGCGTCC GTCGGTGGTG
CGTGGTCAGC AGGTGCGTGC CGGTGATGTG ATCGCCGACA GCTCGAGTAC CGATCAGGGC
GAGTTGGCGC TCGGCCAGAA TGTGTTGGTA GCGTATATGC CGTGGGAGGG CGGTAACTTT
GAGGACGCTA TTCTGGTCAG CGAGCGGCTG GTACGCGAGG ATATCTTTAC GTCGATCCAT
ATTGAAAAGT ATGAGGTTGA GGCGCGCGAT ACCAAGCTCG GTCCCGAAGA GATTACCCGC
GATATTCCAA ACGTTGGGCA GGATAGCCTG CGCAACCTTG ATGAACGCGG TATTATCTAC
ATCGGTGCCG AGGTGCAACC GAACGATATT CTGGTAGGAA AGATCACTCC CAAAGGCGAG
ACCGACTTGA CCGCCGAAGA GCGTCTGCTG CGGGCGATCT TTGGTGAGAA GGCCCGTGAG
GTGAAAGATA GCTCGCTGCG CGTGCCCAAC GGTGTGCGCG GGAAGGTTAT TGATGTCAAA
GTGTTCTCGC GCAGCGAAGG GGCTGAACTA CCGGTCGGCG TGAATCAGAC GGTGCGGGTT
CTGCTTTGCC AGAAGCGCAA GATTAGCGCC GGTGATAAGA TGGCCGGTCG CCACGGAAAT
AAGGGTGTCG TCTCGCGCGT CTTACCGATG GAGGATATGC CGTTCTTGCC CGATGGCCGC
CCGGTGGATA TTATCCTCAA TCCCATCGGT GTGCCGTCGC GTATGAATAT CGGTCAGATT
CTTGAAACCC ACCTCGGCTG GGCCGCCGCC CGCCTTGGGT TCCGCGTCGC CACACCGGTG
TTCGACGGCG CTCACGAGGA TCAGATTAAG GACCTGCTCG TACAGGCTGG CTTGCCTGCC
GATGGGAAGG TAACCCTCTA CGATGGCCGG ACCGGCGAGA AATTCGACCA TCCGGTTACC
GTCGGCTATG CCTATATGCT CAAACTAGCC CACCTCGTTG AAGACAAGAT TCACGCGCGC
TCGACCGGTC CCTACAGCCT TGTCACTCAG CAACCGCTCG GTGGTAAGGC GCAGTTCGGT
GGGCAGCGCT TTGGTGAGAT GGAGGTGTGG GCATTGGAGG CATACGGTGC CGCTTACACC
TTGCAAGAGA TGCTGACCGT CAAATCCGAC GACGTAGTTG GCCGCGTCAA GACGTATGAG
GCAATTGTGA AGGGTGAGCC GATCCAAGAG GCCGGTGTAC CTGAAAGCTT CAAGGTGCTG
ATCAAGGAGT TGCAGAGCCT TGGCCTTAGC GTCGAAGTGC TAAGCGCCGA CGAGAAGCCG
GTTGAGCTGA GCGATGACCT CGATAGCGAC ATCGGTGCCC TCGAAGGTAT TAACCTGAGT
GGTATGGAAC GCGGCGAATT CTAA
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| Protein sequence | MPPLIESVVL QPLIAPIDPG FDGRRSRRIE RRSFARIKDA IDLPLLIETQ LKSFEWFKRE
GLRELFDEIS PITDFTGKNL ELHFREYTFG EPRYDEFECR DRDLTYAAPL RVKVELRILT
TGEIKESEIF LGDFPMMTDN GTFVYNGAER VVVSQLIRSP GVYFKDEKDP TSGRALHTAK
LIPNRGAWLE FETNKRDVIS VKVDRKRKIP VTILLRAISA WIANEDGSGR WAPDNELDKY
GHNEHLIELF RHVDTVAEHL YIQATIDKDP SHNAKEALLE LYKRLRPGDP PTLENARTLI
ESLLFNPRRY DLAKVGRYKL NKNLWERDAR RDGPKAPDLS VRVLLPRDIF RIVEQMILLN
NGYGRPDDID HLGNRRVRTV GELIQQQFRV GLLRLERVVK ERMSLQDPAS ATPNGLINIR
PVVAAMREFF GGSQLSQFMD QTNPLAELTN KRRLSALGPG GLSRDRAGFE VRDVHHSHYG
RICPVETPEG PNIGLIGTMS TFARVNEMGF LETPYRKVYN SIDNAQVWRE KGILLRDVRD
LRTGDLIAAK GTRVDDQIAR QITIGLLRGQ ILREDVVDPN TGELIAEAGT EINRALAERI
VNLPMKQIKI RPVVSQEVDY LSADEEDRFV IVQANAPLDE HNRFLDTTVS CRFGEDFVTE
RVERVDYMDV SPKQVVSVST SLIPFLEHDD ANRALMGSNM QRQAVPLLRP DAPIVGTGME
YRTARDSGQV VVARRDGVVV SATGNRIIVE EDDGKRTEYR LRKFMRSNQD TCINQRPSVV
RGQQVRAGDV IADSSSTDQG ELALGQNVLV AYMPWEGGNF EDAILVSERL VREDIFTSIH
IEKYEVEARD TKLGPEEITR DIPNVGQDSL RNLDERGIIY IGAEVQPNDI LVGKITPKGE
TDLTAEERLL RAIFGEKARE VKDSSLRVPN GVRGKVIDVK VFSRSEGAEL PVGVNQTVRV
LLCQKRKISA GDKMAGRHGN KGVVSRVLPM EDMPFLPDGR PVDIILNPIG VPSRMNIGQI
LETHLGWAAA RLGFRVATPV FDGAHEDQIK DLLVQAGLPA DGKVTLYDGR TGEKFDHPVT
VGYAYMLKLA HLVEDKIHAR STGPYSLVTQ QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT
LQEMLTVKSD DVVGRVKTYE AIVKGEPIQE AGVPESFKVL IKELQSLGLS VEVLSADEKP
VELSDDLDSD IGALEGINLS GMERGEF
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