| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2706 |
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| Symbol | |
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| ID | 7269613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3313331 |
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| End bp | 3317833 |
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| Gene Length | 4503 bp |
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| Protein Length | 1500 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643567532 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_002464010 |
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| Protein GI | 219849577 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAA TTAACGACTT CAATGCCATT CGGATCAGTC TCGCTTCACC TGAAGATATC
CGATCGTGGT CGCACGGCGA AGTCACGAAA CCCGAAACCA TCAACTACCG CACGCTTAAA
CCTGAACGCG ACGGTCTCTT CTGCGAACGT ATTTTTGGTC CAACGAAAGA CTGGGAATGC
TTCTGCGGGA AGTATAAGCG CGTGCGCTAT AAGGGTGTCG TCTGCGATAA GTGTGGAGTC
GAAGTCACCC GGGCTAAGGT GCGACGTGAG CGCATGGGCC ATATTAATCT GGCCTCGCCG
GTGAGCCACA TCTGGTTTGT CAAAGGTACT CCCTCTCGCC TTGGCCTCCT TCTCGATATT
TCGCCGCGAA ATCTTGAGCG TGTCCTCTAT TTCGCCTCGT ACATCATTGT AGATGTGAAG
GAGGATATGC TCCAGGTGGC ACGCGAGATG GTACAGGAGG AGTACGCTGC GCGCCGCGAG
AAGATTCAAA AGCAGGCCGA AGAGAAGCGG ATCGAGCTGA GTACTCAACT GACCCAAGAC
CTCGGCGGTA TGGAGACGGC GCAGCGCAGC ACCCAGCGGC AAATCGAAGA AGATTACCGC
CGTCAGCGCG ATGAGTTGGT CGGCGAAGCC GAACGGCTGC GTGAGCGGCT GGAAGAGATG
AGCGGTACGC TGGCCGATGA AGATATTATC TTCCGGGGCG TGACCGTGGT CGAAGAAGGT
GAACTGATTA ACGACAACAC CCTCGACCAG CTCGATGAAT TGGTCGAACA AGAATTGGAG
GTGCTCGAAG AACGCCGTCG CCGTGATCTG GCTGATGCCG AGCTGCTGAC CGACGCCGAG
CGCGAGCGTA AGGCGTATGA AGCTACCCAA GAGCAGGAGC GATTGCAAGA GCGCCTGCAA
CGCGAGCTGG ATATGCTGGT TCGCGAAGAG AAGGAAAAGC TCGAACAGCT CGATAAACTG
AAGGTGGGCC TGATCATTAC CGAAAACGAG TACCGGCAGT TACGCGATGT TGCACCCGGT
GTCTTCCGTG CTGATATGGG GGCCGGCGCG ATCCGCGAGC TGCTCGAACG GCACCTGAAC
CTCGATAAGC TGGCCGAAGA GTTGCAGGCC GAGATTCAAA CATCACAGGG TCAGCGCCGG
AAAAAGGCGA CGAAGCGGCT GCGCATCGTT GAGGCGTTCC GCAAGAGCGG CAATCGCCCG
GAGTGGATGA TCCTTACGGT ACTACCGGTT ATTCCACCCG ACCTGCGCCC GATGGTGCAG
CTCGATGGTG GTCGCTTTGC TACGAGCGAT CTCAATGATC TCTATCGTCG GGTGATCAAC
CGCAATAACC GGCTCAAGCG GCTGATCGAA CTGAACGCGC CGGAAATCAT CGTGCGTAAT
GAGAAGCGCA TGCTGCAAGA GGCAGTTGAT GCGCTGATCG ATAACGGTCG GCGTGGGCGA
GCAGTTAGCG GTAAGGGGAA GCATCGCCTC AAGAGCCTGA GTGATATGCT CAAGGGCAAG
CAAGGCCGCT TCCGCCAGAA CCTGCTCGGT AAGCGTGTCG ATTATTCGGG CCGTTCGGTG
ATCGTGGTAG GCCCCAATCT GCAACTGCAC CAGTGCGGTC TGCCCAAGAA AATGGCCCTT
GAGCTATTTA AGCCCTTTGT GATGCGCCGA CTGGTCGAAC GTGGTGTCGC CCATAACATT
AAGAACGCTA AGCGTGCCGT CGAACGTGTG CGCCCTGAAG TGTGGGACGC ACTCGAAGAG
GTGATTAAAG ACTATCTGGT GCTGCTCAAC CGCGCACCGT CGCTGCACCG GCTCTCGATT
CAGGCCTTTG AGGCCAAGCT CATCGAGGGA TCGGCGATCC AGCTTCATCC ACTCGTCTGC
GCCGCGTTTA ACGCCGACTT CGACGGCGAC CAGATGGCGG TTCACGTGCC GCTTTCACGG
AAAGCGCAGG AAGAGGCACG CACTCGGATG CTGAGCAAGT ACAATCTGTT GAGTCCGGCG
CATGGGGAAC CGATTATCAC CCCTTCGCAG GACATCGTGC TTGGCTGCTA CTACCTGACA
ATGGTGCGCG ATGGTGCGAA GGGAACGGGT AAGCGGTTCG CTTCGATCGA TGAGGCGATG
TTGGCCTACG AGAAGGGCTT GATCGATATT CAAGCACCGA TCTGGATCCG TATGAATGGT
TCCATCTCTG GTAAGAGCGA CCGTCCTGTG CGCGAATTGC CGCCGGCCAG CGATGGTACA
CCGCGTATGG TCATTGAAAC GACGATCGGA CGTGTGTTGC TCAATAGCGA GCTGCAACCA
CCATTACGCT TCCGCAATCG CCTGATCGAC AAGAAGGGCC TGAAAGAGAT TATCGCCGAT
TGCTACCAGT ATTACACCAG CTTGCGCAAT CTGAGCGAAG CCCAGCTTAA CGAGGTACGG
GCAGCCCATG GCAATAAGCA CGTCCAAGAG TTGGCCCGTA TCTACGGTTC GGAGATGACG
GCCCAGCAAG CCGACCGTAT TAAGACACTC GGCTTCCGCT ACGCTACGCT TGGCGGTATG
ACGATCGGGA TTGACGATAT TGAAGTGCCG GCCAAGAAGT ATGACATCGT GCGCGAAGCC
GAACAACAGG TTGCTGAAGT CGAGAAACAG TTCCGCCGTG GTCTGATCAC CGAAGAGGAG
CGCTATCAAG AGGTGGTACG GATCTGGCAG GAGGCGACTA AGCAAACCAT CGCTGCCGTA
AAGGAGAATC TGAACCCCTT CGGCCCTGTG GCGATGATGT CAACGTCGGG CGCTCGCGGT
AACATCAACC AGATCTCACA GATGGCCGGT ATGCGCGGGT TGATGTCCGA CCCAACCGGA
CGGATTATCG AGCTGCCGAT TAAGGCCAAC TTCCGCGAGG GTCTGTCGGT GCTCGACTAC
TTCGTTTCAA CCCACGGTGG ACGTAAGGGT CTGGCCGACA CCGCGTTGCG TACCGCTGAC
GCCGGTTACC TCACTCGCCG GTTGGTTGAT GTTGCGCAAG ATGTGATTAT CAACATCGAA
GATTGCGGTA CCGAAGAGGG TCTGTGGCTC CATAGCGCCG ACGATGGCGA GTTGATGGAA
AAGCTACAGG TCCGTATGCT CGGACGCATT CTTGCCGCAC CGATCTACGA CAAGACGACC
GGTGAGTTGA TCGCCGACCG CAACACCGAG ATCGATGAAG AATTGGCAGA AAAAATTATC
GCCGCCGGTC ACGAATCGGT CTTTGTCCGT TCGCCTCTGA CGTGCCAGGC CGAACACGGT
CTTTGCCGGA TGTGCTACGG CCGCAACCTC GCTACCGGCA AGTTGGTCGA GATCGGTGAG
GCGGTTGGGA TCATCGCCGC GCAATCCATC GGTGAGCCGG GCACCCAGCT TACCCTGCGA
ACGTTCCACA CCGGTGGTGT CGCCTCCGCC GATGATATTA CGCAGGGTCT GCCGCGCGTG
CAGGAGATCT TCGAGGCACG TGTGCCGAAG GGTAAAGCGC TGCTGGCCGA AATCGACGGC
GTGGTGCAGA TCATACGTGA AGATGAAGGG GTACGTAAGA TTCGCATCGT CTCGACCAAC
GTCTACACCG ATGAGTACCC GCTAACGCGC GGCTTCACAC CGGTGATCGA ATCTGAGAGC
GATGTCTATG AAGGACAGGT GATCGCCGAA GGACCGGGTG GTGAGCAGAT CATCGCTCGG
CTGAGCGGGA AGGCCTTTAT TCAGTCTGAC CGGATTATCA TTAGTCAGGA AGATCACGAA
GAGCGTGAAT TGGTGGTGCC CCACAATGCT CGTATTCGGG TCGAGAATGG CGATCGGGTT
ATGGCCGGGC AACAGTTAAC CGACGGTAGT GCCAATCCGC AAGAGCTGCT TGAATTGCAA
GGTCGAGAAG CAGTGCAACG CTACCTGGTC AACGAGGCCC AAAAGGTCTA CCGCTCGCAG
GGCGTGAACA TCAACGACAA GCACATTGAA GTGATTGCCC GCCAGATGCT GCGCCGCGTG
CGCATCGAAG AACCCGGTGA TACCGGTCTC TTACCCGGCG AGCTGATCGA TAGTGCCGAA
TTCCGCCGCC TCAACAACGA TATTGTCAGC CAAGGTGGTG ATCCGGCAAC CGCGGCAACA
GTGTTGCTGG GCATTACCAA AGCCTCACTG AATACCGACA GCTTCCTCTC GGCGGCTTCG
TTCCAAGAGA CGACCCGCGT GTTGACCGAT GCTGCCATTC AGGGTAAGGT TGACTATCTG
CGCGGTCTGA AGGAGAACGT TGTCATCGGT AAGCTCATCC CTGCCGGAAC GGGGATCGAG
AAGCGGCTTG AACGCCAACA CGAAGATTTG ATCAGCGAGA TGGCACGGAT GCTCGAAGAG
GTACAGCAGG CCGAGAAGAG TGCCGAGCCA ACGACCACCG CCTTGCCTAC TACCAACGGT
CATCAGGCAC CGCAGAGCGA TACCGATGCG TTATTACGGG CACGGCTCGA AGAGTTGCTG
TCCGGTGGTA ACGACCACGA TGATGAAGAG GATTCAGATC ATCCCGATCT GTCCTCACTG
TGA
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| Protein sequence | MLEINDFNAI RISLASPEDI RSWSHGEVTK PETINYRTLK PERDGLFCER IFGPTKDWEC
FCGKYKRVRY KGVVCDKCGV EVTRAKVRRE RMGHINLASP VSHIWFVKGT PSRLGLLLDI
SPRNLERVLY FASYIIVDVK EDMLQVAREM VQEEYAARRE KIQKQAEEKR IELSTQLTQD
LGGMETAQRS TQRQIEEDYR RQRDELVGEA ERLRERLEEM SGTLADEDII FRGVTVVEEG
ELINDNTLDQ LDELVEQELE VLEERRRRDL ADAELLTDAE RERKAYEATQ EQERLQERLQ
RELDMLVREE KEKLEQLDKL KVGLIITENE YRQLRDVAPG VFRADMGAGA IRELLERHLN
LDKLAEELQA EIQTSQGQRR KKATKRLRIV EAFRKSGNRP EWMILTVLPV IPPDLRPMVQ
LDGGRFATSD LNDLYRRVIN RNNRLKRLIE LNAPEIIVRN EKRMLQEAVD ALIDNGRRGR
AVSGKGKHRL KSLSDMLKGK QGRFRQNLLG KRVDYSGRSV IVVGPNLQLH QCGLPKKMAL
ELFKPFVMRR LVERGVAHNI KNAKRAVERV RPEVWDALEE VIKDYLVLLN RAPSLHRLSI
QAFEAKLIEG SAIQLHPLVC AAFNADFDGD QMAVHVPLSR KAQEEARTRM LSKYNLLSPA
HGEPIITPSQ DIVLGCYYLT MVRDGAKGTG KRFASIDEAM LAYEKGLIDI QAPIWIRMNG
SISGKSDRPV RELPPASDGT PRMVIETTIG RVLLNSELQP PLRFRNRLID KKGLKEIIAD
CYQYYTSLRN LSEAQLNEVR AAHGNKHVQE LARIYGSEMT AQQADRIKTL GFRYATLGGM
TIGIDDIEVP AKKYDIVREA EQQVAEVEKQ FRRGLITEEE RYQEVVRIWQ EATKQTIAAV
KENLNPFGPV AMMSTSGARG NINQISQMAG MRGLMSDPTG RIIELPIKAN FREGLSVLDY
FVSTHGGRKG LADTALRTAD AGYLTRRLVD VAQDVIINIE DCGTEEGLWL HSADDGELME
KLQVRMLGRI LAAPIYDKTT GELIADRNTE IDEELAEKII AAGHESVFVR SPLTCQAEHG
LCRMCYGRNL ATGKLVEIGE AVGIIAAQSI GEPGTQLTLR TFHTGGVASA DDITQGLPRV
QEIFEARVPK GKALLAEIDG VVQIIREDEG VRKIRIVSTN VYTDEYPLTR GFTPVIESES
DVYEGQVIAE GPGGEQIIAR LSGKAFIQSD RIIISQEDHE ERELVVPHNA RIRVENGDRV
MAGQQLTDGS ANPQELLELQ GREAVQRYLV NEAQKVYRSQ GVNINDKHIE VIARQMLRRV
RIEEPGDTGL LPGELIDSAE FRRLNNDIVS QGGDPATAAT VLLGITKASL NTDSFLSAAS
FQETTRVLTD AAIQGKVDYL RGLKENVVIG KLIPAGTGIE KRLERQHEDL ISEMARMLEE
VQQAEKSAEP TTTALPTTNG HQAPQSDTDA LLRARLEELL SGGNDHDDEE DSDHPDLSSL
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