| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2671 |
|---|
| Symbol | |
|---|
| ID | 7269578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3274258 |
|---|
| End bp | 3275610 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643567497 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_002463975 |
|---|
| Protein GI | 219849542 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000192246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000276763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA GTCTTTCCGA TCGGTTACAG GCAGTATTCC AGAAACTCGG CAGCAAAGGT
GTTCTCACCG AAGATGACGT GCGTGAGGCG ATGAAGCAGG TGCGCTTGGC CCTGCTCGAA
GCCGACGTCA ACTTTCGAGT GGTGAAAGAT TTTGTGGCGA AAGTTACCGA AAAAGCCATT
GGCGAAGAGG TAACGAAGAG CCTGACTCCA CATCAACAGG TGATCAAGAT TGTCCATCAA
GAGCTGATCA ACCTGTTGGG GACCGAACAT GTTCCTTTAC AAGAAGCGCG CCCCGGTCCA
ACGGTGATTA TGCTGGTCGG TCTGCAAGGT ACCGGTAAGA CAACGTTAGC GGCCAAGCTG
GCCCTGCACC TGCGCAAGAA GGGCAAGCGC GTTCTGTTAG TCGCCGCCGA CGTGTATCGT
CCGGCTGCAA TTACGCAGTT GCAGGCCCTT GGTCGCCAAC TGAATATTCC GGTCTACAGT
GAGGGCACGC AGGCTAGCCC ACCTGACATC GCCGAGCACG CGCTTGAACA TGCGCGTAAA
GAGCTGTTTA ATGTGGTGAT TATTGATACC GCCGGTCGGT TACAAATTGA CGAACCACTC
ATGCAAGAGT TGGAGCAGAT CGAGGCGCGG GTGCATCCAA CCGAACGCTT GTTGGTGGTT
GATGCAATGA CCGGCCAAGA GGCGGTGCGT GTCGCCGAGA CGTTCAACCA GCGGGTTAAG
CTGACCGGTG TGGTGATGAC CAAAATGGAC GGCGACGCCC GTGGTGGTGC GGCCTTGTCG
GTGCGCGCCG TGACGGGGGT GCCGATCAAG TTCCTCTCCA CCGGCGAGAA GGTGGACGGC
AATACGCTCG AGATCTTTCA CCCCGACCGG CTGGCATCGC GTATCCTTGG GATGGGTGAT
GTTCTCTCGC TGATCGAGCG AGCCGAGCAG CTCTACGACG CCGAGCAGGC GAAGAAGATG
CAAAAGCGTC TGAGTAAAGG CGAGTTCGAT TTTGAAGACT TCCTGAATTC GCTGCATCAG
ATGCGGAAGT TAGGGCCGCT CCAGCAAATT ATTGCCATGA TTCCCGGCCT TAACCAATTG
GCCCGCAACG AAGAGTTGCT CGATGAGCGG CACGTGAAGC GGGTCGAGGC GATCATCTAC
TCGATGACAC CGGAAGAGCG TCGTCACCCT GAAATTATTA AAGGGAGCCG ACGCGAGCGC
ATTGCCCGTG GTAGTGGGAC ATCGGTGCAA GAGGTTAGTC AGCTTGTTAA GCAGTTCCAG
CAGATGCAGC GCATGATGAA GCAACTTGCC GGTAAAGCCG GTAAGGGGCG CGGTGGGATC
GATCCGAATG AGTTGCTCCG GCGCTTGCGT TAG
|
|---|
| Protein sequence | MFESLSDRLQ AVFQKLGSKG VLTEDDVREA MKQVRLALLE ADVNFRVVKD FVAKVTEKAI
GEEVTKSLTP HQQVIKIVHQ ELINLLGTEH VPLQEARPGP TVIMLVGLQG TGKTTLAAKL
ALHLRKKGKR VLLVAADVYR PAAITQLQAL GRQLNIPVYS EGTQASPPDI AEHALEHARK
ELFNVVIIDT AGRLQIDEPL MQELEQIEAR VHPTERLLVV DAMTGQEAVR VAETFNQRVK
LTGVVMTKMD GDARGGAALS VRAVTGVPIK FLSTGEKVDG NTLEIFHPDR LASRILGMGD
VLSLIERAEQ LYDAEQAKKM QKRLSKGEFD FEDFLNSLHQ MRKLGPLQQI IAMIPGLNQL
ARNEELLDER HVKRVEAIIY SMTPEERRHP EIIKGSRRER IARGSGTSVQ EVSQLVKQFQ
QMQRMMKQLA GKAGKGRGGI DPNELLRRLR
|
|---|
| |