| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2667 |
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| Symbol | |
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| ID | 7269574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3265995 |
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| End bp | 3267956 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643567493 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002463971 |
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| Protein GI | 219849538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000189051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTACGC CCGATCTATC AATGCTACAA GCTGAGTGCG CACAACTCCG TACTCAGATA
AGCAACCTGC AAGCCGAATT GCGCCGTTTC AAGAGTATTG TGGAAGATAC CGACCAACTC
ATTACCGAAG TCGATCCACA AGGTTGTTTT ACCTACGTCA ACTCAGCCGC AGAGCGCTAT
TTTGGTGAAC CACCGGCAGC GTGTTTAGGT CGCTCGTCGC TCGACTTTCT CCACCCTGAT
GATCGAGAAC CGGCACGTCA GGCGTTGATC GATCACTTAC AACGGGGCGA ACGAATGCTC
ACCATCGAAA ACAGGATTGT GCATCGGTCT GGACAGATCA CACCAATGCT CTGGACGATC
ACCATCCATT ACGATGAGCA AGGGCAGTTT GCCAGCGCTA CGTCAATCGC CTCGGAGATT
TCGCATATTC AGCGTTTGCG CAATGAACTG AGTGCCAGCC GTGCGATGCT GCAATTGGTC
ATCGATAACT TGCCGCAAGC TGTTTTCTGG AAGGATCGGG AAGGGCGTTT CTTGGGATGC
AACCGTCGCT TTCTCGCCGA TGCCGGCTTA CAGTCGGTTG ATGAGATTGT TGGGCGGACT
GACTTCGAGC TGCCATGGCG TGAATATGCT GAAGCATACC GGGCCGATGA TCTAGCAGTG
ATACAGCATG GGCCGAAATA TAACATCGAA GAGCCACTCA TCCGCCAGGA TGGGACAACT
ATCTTGATCC GAACGAGCAA AATCCCCTTG CAACGCAACG GTGAAATCAT CGGTGTGTTG
GGTAATTACG AGGATGTCAC CCTTCTCCGC CAACAAGAGG ATGAACTCCG TACCTTTAAG
CTTCTGGTGG AAAATGCACC GGATGGAATT GCCATTGCCG ACCTCACATT AACATTGCAG
TATACCAACC CGGCACTGGC GGGAATGCTC GGTTACGAGA CCTTAGTGGG GGTAAACGTC
AAAGACATCT TTTATCCACC CGATCTTCCC ATCCTCCAGC AGATTGCCGA GCAAGTTATG
CAGGGGCTGA CGCCGCGCGA GATCGTGCGC TATGTGCATC GTGATGGTAG GTTGGTGACG
GTGCAAGCAT CGGCGTTAGC ATTATACGAT CGCCACGGTC ATCTATCGGG CTATGCTTCT
ATCAATCGCG ACATTACCGA GCAGATCGAA GCCGAAGAGG AATTGCGCCG CAGTGAGCGA
CGCAACCGTG CCTTGCTCGA AGCAATGCCC GATCTGATGT TTTTACTCAG TGCTGATGGG
GTCTTCCTTG ATTACAAAGC CGATCGTAGC GGTAGGTTGC TCCTCCCACC CGAAGCTTTT
TTGGGCCGAC ACGTGACGGA AGTCTTACCA CCATATCTCG CCAATCAGGT GTTGGTTCAC
ATGGCGCGGT TACGCGAAAC CGGCGAGATG CAACAGTACG AATATCAGCT CGATTTTGAT
GGGCGGATTG AAGAATATGA AGCGCGGATG GTGTCGAGTA ATCAAGATGT ACTGATCCTT
GCCCGTAACG TTACTGAACA GCGCCGGATG GAACGTGAGC GCGCTGCGAT GCAAGAGCAG
ATCATCGCCG CCCAACAAGC GACACTGCGC GAATTGAGTA CGCCGCTGAT GCCGATTGCC
AACGGTGTGG TAGTGATGCC ATTAATCGGC GCGATTGACA CAGCGCGGGC ACAGCAGATT
ATGGAGACAT TGCTGTACGG AGTTGCCGAA CACCATGCAC AGGTAGCAAT CATTGACATC
ACCGGTGTGA AGGTGGTTGA CACTCAAGTT GCCGGAGCAT TGATGCGCGC TGCCCAAGCG
GCGCGAATGT TGGGGGCACA AGTGCTATTG ACCGGTATTA GTCCTGAAAT AGCGCAAACC
TTAGTCCATA TTGGGGCCGA ACTGCGTGAT CTGGTTACGA AAGCAACGTT GCAAGAGGGG
ATTGATTACG CTTTGAAGCG ACAGATGACA GTCCGACGCT GA
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| Protein sequence | MTTPDLSMLQ AECAQLRTQI SNLQAELRRF KSIVEDTDQL ITEVDPQGCF TYVNSAAERY
FGEPPAACLG RSSLDFLHPD DREPARQALI DHLQRGERML TIENRIVHRS GQITPMLWTI
TIHYDEQGQF ASATSIASEI SHIQRLRNEL SASRAMLQLV IDNLPQAVFW KDREGRFLGC
NRRFLADAGL QSVDEIVGRT DFELPWREYA EAYRADDLAV IQHGPKYNIE EPLIRQDGTT
ILIRTSKIPL QRNGEIIGVL GNYEDVTLLR QQEDELRTFK LLVENAPDGI AIADLTLTLQ
YTNPALAGML GYETLVGVNV KDIFYPPDLP ILQQIAEQVM QGLTPREIVR YVHRDGRLVT
VQASALALYD RHGHLSGYAS INRDITEQIE AEEELRRSER RNRALLEAMP DLMFLLSADG
VFLDYKADRS GRLLLPPEAF LGRHVTEVLP PYLANQVLVH MARLRETGEM QQYEYQLDFD
GRIEEYEARM VSSNQDVLIL ARNVTEQRRM ERERAAMQEQ IIAAQQATLR ELSTPLMPIA
NGVVVMPLIG AIDTARAQQI METLLYGVAE HHAQVAIIDI TGVKVVDTQV AGALMRAAQA
ARMLGAQVLL TGISPEIAQT LVHIGAELRD LVTKATLQEG IDYALKRQMT VRR
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