Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2651 |
Symbol | |
ID | 7269557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3246081 |
End bp | 3248042 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643567476 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002463955 |
Protein GI | 219849522 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTTG ATCCCTCATC GATGTCCAAT AATAGCCTGC TATCCGAGCG CCTGCTCGCG ACGATAGAAC GAACCTCGCT TCTCGTTACT GAAACTGATG CACAGGGTGT GATCACCTTC GTTAACCCGG CGGCCCAACG CTTTTTCGGA TATACTCCTG CCGAATGTAT TGGCAAGACG GTACTTGAGT TGACCCATCC CGCTGACCGT GATCGTTTGC AGCAAACAAT TATCGAGTGC GTGCGTGATG GTCGGCACCT GGCTGAGATT GAGAACCGGA TACTGCATCG CGATGGCTCG GTGTTTCATT TCCTTTGGTC GGTAGCGATC CACTATAGCG ATCAAGGAAC TATTATCGGT TTTACCTCGA TTGGGCAAGA TATATCGGCC TTACACCAGC TGCGCAGCGA GCTGTACGAG AAGCGCGAGA TGTTGTATAC AGTCATCGAT CATTTACCAC TCGGCGTGTT TTGGAAGGAT AAAGAATCGC GCTTTCTCGG CTGCAACCGA CGTGTCCTGG AAGATTCGGG TCTGAGCAGC TTTAAAGACA TTATCGGCAA GACCGACTTT GAATTGCCGT GGCGTCGACA AGCAACCTAC TATCAGTACA GTGACCGCGT GGTGATGGCC TCTGGTCCGC AGACGAATAT TGAAGAGACG CTCGTCCGCG GTGACGGGAG GCAAATTTGG ATCCGCACAA CAAAGCTGCC CTTGCGTCGT CAGGGTGAAG TGATCGGTGT GCTCAGTTTT TATGAAGATA TTACCGAACA ACGTCAGCAA AACGAATATC TGCGCACACT CCGGTTACTG GTGGAAAATG CTCCTGACGG GATCGGTATC GTTGATCCGG ATTTGCGGCT GACCTACACC AACCAGGCTT TTATCGAGCT ACTAGGCTAT GAGCAATTGG TCGGTATAGG GTGGCCCGAT CTAGTTCACC CTGATGATCG CGAACACCTT GTCCACATGG TGCGACGGGC GACAACTGGG GAAGCTGCGC ACGGTACCTT GCGCTACCTG CGCCGCGATG GGTCGTTCTT AACGGTGCAA GTAGCGATTC CGGTGTTACG CGACCGTACC AACAAACTGA TGGGTTTTGG TGTCATCAAT CACGATCTGA CGGAACAACT CGAGGCGATG GCCCGTTTGC AGGCGAGCGA ACAGCAGCAG CGAGCGTTGT TGCAAGCTTT GCCCGATTTG ATGTTTTTGC TCAGTCGCGA CGGGGTGTTC TTGCAGTACA AAGCCGATGG TAGTGATGAA CTAGCTGTGC GGCCAGAAGT CTTTCTCCAT CGCCGTTTTG ATGAAGTATT ACCACCCGTA CTCGCTGAGC TGACGCGGCA CCATCTCGAG ATCGTGAACC AAACCGGTCA GCCGCAGCGC TACGAATATC AATTGGAGAT AGGTGGCGAG TTGCACGATT ATGAAGCGCG TATGCATCCG AGCGGTGATA ATGTGTTGGT ACTGGTGCGT GATATAACCG AGCAGCGCCG CGCCGAACGT GAGCGACAGA CGTTGATACT GCAAGAGCAG ATCATTCAAG CTCAACTTGT GGTGCTGCGT GAGTTGAGCA CACCGCTGCT CCCGATTGCC AATGGCGTGG TCGTGATGCC GCTGATCGGA ACCATTGACT CATCACGTGC GCAACAGGTG ATGGAGACTT TACTCGATGG AGTTAATCGG TATCAGGCAA CGGTAGCCAT CATTGATATT ACCGGCGTGA AGGTCGTTGA TACGCAAGTC GCCGGTGCTC TGATCCGCAC TGCACAGGCG GCGTCCTTGT TAGGCGCACA GGTGGTGTTG AGTGGGATCA ATCCTGAGAT TGCGCAGACG TTAGTGCAGC TTAGTATTGA TCTCGCCGGT ATCGTAACCA AGGCAACGTT GCAAGATGGT ATTGCGTATG CCTTGAGCCG ACAACAGTTG CGCACTCGTC CTGTTCCGAC GGCGCTGAAG ATGGTACGAT AG
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Protein sequence | MHLDPSSMSN NSLLSERLLA TIERTSLLVT ETDAQGVITF VNPAAQRFFG YTPAECIGKT VLELTHPADR DRLQQTIIEC VRDGRHLAEI ENRILHRDGS VFHFLWSVAI HYSDQGTIIG FTSIGQDISA LHQLRSELYE KREMLYTVID HLPLGVFWKD KESRFLGCNR RVLEDSGLSS FKDIIGKTDF ELPWRRQATY YQYSDRVVMA SGPQTNIEET LVRGDGRQIW IRTTKLPLRR QGEVIGVLSF YEDITEQRQQ NEYLRTLRLL VENAPDGIGI VDPDLRLTYT NQAFIELLGY EQLVGIGWPD LVHPDDREHL VHMVRRATTG EAAHGTLRYL RRDGSFLTVQ VAIPVLRDRT NKLMGFGVIN HDLTEQLEAM ARLQASEQQQ RALLQALPDL MFLLSRDGVF LQYKADGSDE LAVRPEVFLH RRFDEVLPPV LAELTRHHLE IVNQTGQPQR YEYQLEIGGE LHDYEARMHP SGDNVLVLVR DITEQRRAER ERQTLILQEQ IIQAQLVVLR ELSTPLLPIA NGVVVMPLIG TIDSSRAQQV METLLDGVNR YQATVAIIDI TGVKVVDTQV AGALIRTAQA ASLLGAQVVL SGINPEIAQT LVQLSIDLAG IVTKATLQDG IAYALSRQQL RTRPVPTALK MVR
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