Gene Cagg_2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2627 
Symbol 
ID7267218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3220170 
End bp3221948 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content56% 
IMG OID643567453 
ProductABC transporter related 
Protein accessionYP_002463932 
Protein GI219849499 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACG GGTTTGATGA CGATACTATT CTGGGAAAAG CCTACGATGG CCGGCTGGTG 
CGCCGCTTGG CCGGTTATGT CATCCCATAT TGGGGTCGGT TGAGTTTGGC AATTGGCTTG
CTACTTGGGG CAATTCTGAC CGATCTGCTG CCCCCATTGC TCATCCAACA AGCTATCGAT
GGCCCGATCA GTGCCGGCGC TGTCGATGGG GTCTGGCCTT ATTTTGTGGC GTTTCTCGGT
GCGTTGCTGA CCAACTTTGC GTTTCGTTAT AGTCACTCCT ATTTCATCAA CAGCGTCGGG
CAGCAGGTCA TGAAAGATCT GCGCGTGGCG ATCTTTCGTC ATATTCTGTC ACAGAGTCTC
TCCTTCTTTA ACCGCAATCC GGTCGGACGC TTGATTACCC GAATTACCAA CGATGTCGAT
GCCCTCAACG AGTTTTTGAC GCAGGGCGTG GTGATGATCA TCGCCGACCT GCTCACCCTG
ATCGGGATTA TCGTTGTCTT GTTCGTTCTC AATTGGCGAC TGGCCCTGAT TAGTGTGGCG
ATATTGCCGG TATTGGCCCT GATTGTGGCG ATTTACCAGC GGTTTATGCG CACGACCTAT
CGGCTTGTGC GGCAGCGCTT GGCCCGGATC AACGCCTTCC TCAGCGAGCA AATTAGCGGT
ATCCTCGTGA CCCAGTTGTT CAACGGCGAA CATCGCAGCC GCGCACATTT TGAGCGTCTC
AGTGACGAAT ATATGCAGGC TAACATTCGT TCGGTGCTCA TCTTTGCCAT TTTCATTCCG
TCGGTCAACC TCCTCGCTAC CATTGGCACC GCCGGGTTAC TCTGGGGCGG AGGTAATGGC
GTACTGGCCG GCTGGGCCTC GCTCGGCACA CTCGCCGCGT TTATCCAATA TCTTGAACGT
GCCTTCCAAC CCATCCGCAA TCTCGCCGAA CGCTATACCG TTCTGCAATC GGCCATGGCA
TCTGCCGAGC GCATCTTCAC CGTACTCGAC ACCCAAGCCG AAGTGCGCGA TCCGGATCGG
CCCCGTCCAC TCCCCAAACC GGTACGTGGC GAGATCGCGC TGCACAATGT CGTCTTCGGC
TACGATCCGG CAGAACCGGT CCTACGCGGC ATTACGCTGC ACATTCCCCC CGGGCAGTCG
GTAGCGATTG TCGGGGCAAC CGGCGCCGGC AAGAGTTCGT TGGTCGGATT ACTCGCCCGC
TTTTACGATG TGCAATCTGG TCAGATTACA CTCGACGGTG TCGACATTCG CGAAGTGGCG
CAAGCCGAAC TACGCCGCCA TATTGCTGCC GTCCCCCAAG ACCCGGTCTG CTTTAGCGGC
ACGATTGCCG GTAATATTCG CCTCCACAAT ACGGAAATTA GTGACGACCA GGTACGAGCC
GCCGCCGAAC TGGTCGGCGC ACACCGTTTC ATCGAGCGGC TCCCCGGCGG TTACGAGTAC
GAGGTACGTG AGCGTGGCGC CAATCTCTCG ATCGGCCAAC GCCAATTGCT TGCGTTTGCA
CGCGCTATTG CCTTCAATCC AGAGGTATTG CTCATTCTCG ACGAAGCAAC CAGTAGCGTT
GATACCGAAA CCGAAGCTTT GATCCAAGAG GCACTCACCC GCTTGATGCG TGGTCGTACC
AGCATCATCA TTGCCCATCG GTTGAGCACG ATACGGCATG TTGATCGGAT TATCGTGTTA
CACAAGGGGC GAGTGGTCGA AGACGGCACT CATGAGGAGC TGCTAGCCCG ACGTGGTTAC
TACTACCGAT TATATCAATT GCAGTTTATC GAGGTCTAA
 
Protein sequence
MSHGFDDDTI LGKAYDGRLV RRLAGYVIPY WGRLSLAIGL LLGAILTDLL PPLLIQQAID 
GPISAGAVDG VWPYFVAFLG ALLTNFAFRY SHSYFINSVG QQVMKDLRVA IFRHILSQSL
SFFNRNPVGR LITRITNDVD ALNEFLTQGV VMIIADLLTL IGIIVVLFVL NWRLALISVA
ILPVLALIVA IYQRFMRTTY RLVRQRLARI NAFLSEQISG ILVTQLFNGE HRSRAHFERL
SDEYMQANIR SVLIFAIFIP SVNLLATIGT AGLLWGGGNG VLAGWASLGT LAAFIQYLER
AFQPIRNLAE RYTVLQSAMA SAERIFTVLD TQAEVRDPDR PRPLPKPVRG EIALHNVVFG
YDPAEPVLRG ITLHIPPGQS VAIVGATGAG KSSLVGLLAR FYDVQSGQIT LDGVDIREVA
QAELRRHIAA VPQDPVCFSG TIAGNIRLHN TEISDDQVRA AAELVGAHRF IERLPGGYEY
EVRERGANLS IGQRQLLAFA RAIAFNPEVL LILDEATSSV DTETEALIQE ALTRLMRGRT
SIIIAHRLST IRHVDRIIVL HKGRVVEDGT HEELLARRGY YYRLYQLQFI EV