Gene Cagg_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2612 
Symbol 
ID7267203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3198515 
End bp3199684 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID643567438 
Productprotein of unknown function DUF58 
Protein accessionYP_002463917 
Protein GI219849484 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0390859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTT TGCGTGCCGT TACCCTGCTT GCCCTGATCT GGCTGGCTTT TGACCCTGGC 
CCGGCAGTGA GTTTCGCCGT CTACGTCTTG ATCGGTGTGC AGGTCATCGG CTGGCTGTGG
CCGCGTCTAG CCGGCCGGTA CATCGTTTGG CAACGGCACG CGCCGCTCGT GCTCGCCCCT
GATGAAGTTG GTGAAGTGAC GATCACGATT TCGTATCAGG GGCGCCTGCC GTTACCCTAT
CTCATCGTGA CCGAAGATGT GCCGCCGTCG TTGAGTGCTG TCACCCGCAA ACGTTGGGTG
CTGAGCCTGC GCCCTGGTCA GCGGTACACG CTTCGCTATC AGGTGCAGGG CCGTCAACGT
GGTCTCTACT GGTTGGGACC GTTGCGGCTC GTGATCGGTA CGGTGATCGA CCGCAATGAG
GTGTTGATCG GCGAACACCA GCCGACGCCA CTAACGATTG TTCCGCATGT TGTCCCGTTA
CCGCTGCTCG AATTACCCGC CGGTCTGCCT TATAGCCAAG AGCGGCGTCG CTTGAGTTTG
TTCGATGATC CGGCTCAAAC AATCGGTGTC CGTCACTATC GGCCCGGCGA CTCGCCCCGC
TTGATCGACT GGAAGACGAG TGCCCGACTG GGTGAGTTGC ATGTGCGTGA GTTGGCGCCG
GTGATCGCCC GGATGACCGT TATTGCCCTT GAATTTAGTG AAACAGCGTA CCGGGGCCGT
TTTGCCCGTG ATGACCGTGA ACGGGCTGTG ATCGCGACGG CCTCGTTGGC GACGACTCTG
ATCAATCGTC AACAGGCGGT TGGGCTGTGT AGCAACGGTT ATGATCCGCT GACCAAAGCA
CCGATAGTAC CACTATTACC GCGTGCCGAA CATGATCACT TGCGGACCCT GTTACTGCTC
CTGGGCCGGA TCGAGCCGGT GTCTACCGGT AGTGTGTTAA CCGAACTGTC ATCTGGTACA
CTCAACCTGA GCTGGGGGAG TACCCTGATC ACCGTTACCG CTGCACTTGA TGAAGCATGG
TTGGCCGGCC TGACGATGCT TCGTCGGCGT GGGTTATATG TAGCGGTGAT CCTCGCCGAT
CCGGGACCAT CCGATGTGTT GCAAGCGCGA CGGTATGGTA TCGCTGCCTA TCGTCTCGAC
CGTGCCGGAG GCATTGTGGT GGATGCCTGA
 
Protein sequence
MTFLRAVTLL ALIWLAFDPG PAVSFAVYVL IGVQVIGWLW PRLAGRYIVW QRHAPLVLAP 
DEVGEVTITI SYQGRLPLPY LIVTEDVPPS LSAVTRKRWV LSLRPGQRYT LRYQVQGRQR
GLYWLGPLRL VIGTVIDRNE VLIGEHQPTP LTIVPHVVPL PLLELPAGLP YSQERRRLSL
FDDPAQTIGV RHYRPGDSPR LIDWKTSARL GELHVRELAP VIARMTVIAL EFSETAYRGR
FARDDRERAV IATASLATTL INRQQAVGLC SNGYDPLTKA PIVPLLPRAE HDHLRTLLLL
LGRIEPVSTG SVLTELSSGT LNLSWGSTLI TVTAALDEAW LAGLTMLRRR GLYVAVILAD
PGPSDVLQAR RYGIAAYRLD RAGGIVVDA