Gene Cagg_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2588 
Symbol 
ID7267177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3154304 
End bp3155719 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content59% 
IMG OID643567412 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_002463893 
Protein GI219849460 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000335459 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCGC AAGCACAGGA TCGGCGCGCA ATGTTGCGGT CTGAACTGCT CGGTCTGGTG 
CGTGAGCAAG TGACGGACGA AGCTATCGAG TCACAGATCG AGACGTTACT GGCCGAGATA
TTGGCCGATG ATCCGGCGGT TGAGCCGCAA CCGGTTGTGA TCGACCAACA GCCCCCCGAT
CAGCGTATCG TTGTAACCGG TATTGGTGTG GTATCGCCGT TCGGGGTGGG GCTTGAGCCA
TTTTGGTCGG GGTTAACGGC GGGGCGCAGT GCGATTGGAC GGATTACCTT TTTTGATCCG
AGCAGCTATC CCTGCCAAAT TGCCGGGCAA GCTAACGATT TTCAGCCTCA AGCGTTTATG
GACGCCAAAG AGGCCCGGCG GATGTCGCGG GCGAGTCAGA TGGCGGTGGC TGCCGCGCGT
ATGGCCGTCG AACATGCCCG CTTGCCGTTA GAACGAATGG ATCGCGATGA GGTAGGTGTG
CTCATTGCAA GCGGTACTAC CTCGATGCCC GACGTTGAAC AGGCGGCAGC GACATTGCTT
CAGCGCGGTG GTATGAAGAT TAGTCCTTTT TTTATTCCGG CGGCCCTGCC CAATATGCCG
GCCAGTCAGG TGGCGATCCA GCTTGGTTTG CGTGGCTACA CGACGGCTAT TTGCACGGCT
TGCGCAGCCG GAGCGCAGGC CATCGGCGAA GCGGCAGAGG TGATCCGACG TGGTGATGCA
GAGGTGATGT TGGCCGGTGG TGCCGAAGCG CCGATTACTG CTCTGAGCTT GGGTGCGTTT
TGCGTGTTGC GGGCGCTGAG CACGCGCAGC AACGATGAAC CGGCACGGGC ATCGCGCCCA
TTCGATGCAC TCCGCGATGG TTTTGTGCCC GGTGAAGGTG CTGCTGTGCT GGTGCTCGAA
CGGCTTAGCA GTGCCCAACA GCGTGGAGCA CCAATCTTGG CCGAACTGAT CGGGTATGGA
GTCTCGGCGG ACGCCTACCA CGTCACTGCC CCCGATCCCG ATGGCGAGGG AGCAGCATTG
GCGATGCGGC GGGCCTTGCA TCACGCCCGT ATCTCGCCGC AGCAGGTCGA TTATATTAAC
GCCCACGCTA CCAGCACACC TGCCGGTGAT ATTGCCGAAA CGCGGGCGAT TAAACAGGTC
TTCGGTGAGT ATGCCTACAG TGTGCCGATC AGCTCGATCA AATCAATGAT CGGCCACCTG
ACCGCCGCAG CCGGCGCGGT TGAGGCTGTC GCTACCATCT TGGCGTTGCA TCACGGTGTG
ATTCCGCCAA CTATTAATCT TGAACATCCC GATCCTGAGT GTGATCTCGA TTATGTGCCA
AATGTCGCAC GCTCGTCAGC TTTGCAAGTA GCGATCTCGA ATTCGTTTGG CTTTGGTGGG
GTGAATGCAG TGTTGGTGTT TCGTAAAGTG ATGTGA
 
Protein sequence
MTPQAQDRRA MLRSELLGLV REQVTDEAIE SQIETLLAEI LADDPAVEPQ PVVIDQQPPD 
QRIVVTGIGV VSPFGVGLEP FWSGLTAGRS AIGRITFFDP SSYPCQIAGQ ANDFQPQAFM
DAKEARRMSR ASQMAVAAAR MAVEHARLPL ERMDRDEVGV LIASGTTSMP DVEQAAATLL
QRGGMKISPF FIPAALPNMP ASQVAIQLGL RGYTTAICTA CAAGAQAIGE AAEVIRRGDA
EVMLAGGAEA PITALSLGAF CVLRALSTRS NDEPARASRP FDALRDGFVP GEGAAVLVLE
RLSSAQQRGA PILAELIGYG VSADAYHVTA PDPDGEGAAL AMRRALHHAR ISPQQVDYIN
AHATSTPAGD IAETRAIKQV FGEYAYSVPI SSIKSMIGHL TAAAGAVEAV ATILALHHGV
IPPTINLEHP DPECDLDYVP NVARSSALQV AISNSFGFGG VNAVLVFRKV M