Gene Cagg_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2577 
Symbol 
ID7267166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3143165 
End bp3144688 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content51% 
IMG OID643567401 
ProductABC transporter related 
Protein accessionYP_002463882 
Protein GI219849449 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.589076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC CTATTCTCGA AATGCGCCAC ATCACCAAAG AGTTCCCCGG TGTACGCGCA 
CTTGACAACG TGACGTTTAG TGTCAAGCGC GGCGAAATCC ACTGTCTCGT CGGGGAGAAT
GGCGCCGGTA AATCCACTCT CATGAAGGTA CTCAGCGGTG TTTATCCGTA TGGTACCTAC
AGCGGCGAAA TTCTGATCAA CGGTCAACCC CAACGCTTTA CCGGTATTGC CGATAGCGAA
CGGGTAGGGA TCGGTATCAT CTATCAAGAA TTGGCTCTGG TACCGGAATT AACCGTCTAC
GAAAATATCT TTCTCGGCCA CGAAATTAGT CGCAACGGCA TCATTGACTG GAACGAAACC
ATCCGCCGTG CCGATGAAAT GTTGCGTAAA GTCCGCCTCA ATGTGAATCC GGCAGCAAAA
ATCCGCGATC TCGGTGTAGG CAAGCAGCAA CTGGTCGAAA TTGCGAAAGC ACTAAGCCGA
GCAGTCAAGA TTCTAATCCT CGATGAGCCA ACCGCTGCGC TCAACGAAGA TGATAGTGAA
AATTTATTGA ATCTGTTACG TGAATTGCGC GATAACGGCG TGACCTGTAT TCTCATTTCG
CACAAATTGA AAGAGGTGTT ATCGGTCGCG GATACGGTGA CGGTGCTACG CGATGGGAAG
ACGGTCTGCA CACTTGATGC CCACAAAGGT GAGGTGAACG AGCAGACCTT AATTCGCAAT
ATGGTTGGTC GTGAAATTAC CAACATCTAC CCCCGGCGTA CCCATCAAAC TGGTCACGAG
GTGGTGCTGG AACTGCGCAA TTGGTCGGTC TTCTCACCTG ACGTCGGTCG CTATCTACTC
CGTGATGTCA ATATACAGGT GCGTAAAGGT GAGATCGTTG GTTTAGCCGG GCTAATGGGT
GCCGGTCGGA CCGAACTCGC GCTCAGTATC TTTGGGAATG CGCCGGGCTA CCGCTTAAGC
GGCGAATTGT GGCTCAAGGG GCGCAAACGG CTGTTCCACC ACCCGCGTGA AGCAATTGCC
GCCGGGATGG CATATGTTTC AGAGGATCGG AAGGCGAAAG GTCTCGTGTT GATCCAGGAT
GTGCGTCAGA ATATCACGCT GGCCAACTTG CGGGCATTGG CAACCAATGG CGTGATCGAC
CGCAATGCCG AGATTCAGAT CGCCGAAAAC TATCGTAAAT CGCTCAATAT CAAAACACCA
ACCATTGAGC AGCAAGTAGC GAATTTGAGT GGTGGCAATC AACAGAAAGT ATGTCTCGGT
AAATGGCTGT TTGTCCGACC CGATCTTCTG ATCCTCGATG AACCGACCCG TGGTATTGAT
GTTGGGGCGA AATACGAGAT TTATCAGTTG ATGAACCAAC TGGTGAGCGA AGGGATGAGC
ATACTGATGA TCTCGTCGGA ATTGCCCGAA GTGTTGGGAA TGAGTGATCG CGTCTACGTC
GTGTCCGGTG GGCGTATCAA AGGTGAGCTG CCGATTGCCG AGGCGACCCA AGAGAAGATT
ATGGCGTTGG CAGTAGATTA CTAA
 
Protein sequence
METPILEMRH ITKEFPGVRA LDNVTFSVKR GEIHCLVGEN GAGKSTLMKV LSGVYPYGTY 
SGEILINGQP QRFTGIADSE RVGIGIIYQE LALVPELTVY ENIFLGHEIS RNGIIDWNET
IRRADEMLRK VRLNVNPAAK IRDLGVGKQQ LVEIAKALSR AVKILILDEP TAALNEDDSE
NLLNLLRELR DNGVTCILIS HKLKEVLSVA DTVTVLRDGK TVCTLDAHKG EVNEQTLIRN
MVGREITNIY PRRTHQTGHE VVLELRNWSV FSPDVGRYLL RDVNIQVRKG EIVGLAGLMG
AGRTELALSI FGNAPGYRLS GELWLKGRKR LFHHPREAIA AGMAYVSEDR KAKGLVLIQD
VRQNITLANL RALATNGVID RNAEIQIAEN YRKSLNIKTP TIEQQVANLS GGNQQKVCLG
KWLFVRPDLL ILDEPTRGID VGAKYEIYQL MNQLVSEGMS ILMISSELPE VLGMSDRVYV
VSGGRIKGEL PIAEATQEKI MALAVDY