| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2548 |
|---|
| Symbol | |
|---|
| ID | 7269394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3103995 |
|---|
| End bp | 3104618 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643567372 |
|---|
| Product | amidophosphoribosyltransferase-like protein |
|---|
| Protein accession | YP_002463853 |
|---|
| Protein GI | 219849420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.332374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGAT GGTTGTTTCC AGACTACTGT GCCGGATGCG GTCGTCTCAC CGGAGAGCTA
TTCTGCGCCA ATTGTCGCGC TCTTCTACGA CCCTACCCAC CATTCCCGCC GCCAACCGGC
TTAACTGCGG CACGGGTAGC ATTCCGTTAC GAAGGCGGCC TCGCTCACGC GATACATCGG
CTCAAATACG GTCATCGCCG GCGAATCGCG CGTCCGCTCG GCGATCTCCT CGCCGCCGCC
GCCGGCCCGC TCGACGCCGA TGCCCTCATT GCCGTGCCGC TGCACCCGAC TCGGCTGCGC
GAACGTGGCT TCAACCAGGC CGCCGAATTA GCGGCTCGGC TCCAACGTCC CGGCGCACCA
CCACTAATCG ACGGCCTTGC CCGCGTGCGC GCCACCAACC AACAAGCCCG GCTGGAAGCC
CCAGCCCGCA CCGCCAACGT CGCCGGAGCA TTCGTCTGGG TCGGGTCGAC ACCACCGCCG
CCCCGTATCA TCCTCATCGA CGACGTCCTC ACCACCGGCG CAACCCTCGC CGCCTGCGCC
GCCGCCCTCC GCACCGCCGG CGCCCACGCG GTCAGGGCCC TCGCTCTGGC CCGCTCGGTG
ATTGATGATG CCCCTCGCCC TTAA
|
|---|
| Protein sequence | MIGWLFPDYC AGCGRLTGEL FCANCRALLR PYPPFPPPTG LTAARVAFRY EGGLAHAIHR
LKYGHRRRIA RPLGDLLAAA AGPLDADALI AVPLHPTRLR ERGFNQAAEL AARLQRPGAP
PLIDGLARVR ATNQQARLEA PARTANVAGA FVWVGSTPPP PRIILIDDVL TTGATLAACA
AALRTAGAHA VRALALARSV IDDAPRP
|
|---|
| |