Gene Cagg_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2539 
Symbol 
ID7269385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3096095 
End bp3096859 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID643567365 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002463846 
Protein GI219849413 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase
[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000120354 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CAAACCTGTC ATCAGCCTTT ACCGGTCTGC GGCTGCTAGC CGATGAAACA 
CGCTGGAAAC TCATCAGCGA ACTTCGTGAG AGCGACCGAC AAGTCGCGGA ATTGGTTGCA
CGCACCGGCC TGGCACAGAA CCTGGTTTCG TACCATTTGC ACGTACTCCG CCAATCCGAA
CTGGTCAACA CGCATCGCAG TGATGCCGAC GGGCGAGTCG TCTACTATAG CCTTAGTTTG
ACGGCACTGG CGCGATTGCT GGCCCAGGTA AGCGAGGAGT TGGCGATACC AACCACTCCA
CCACCATCGT TACCGCATGT GAAAGTGGCT TTTCTCTGTC GTGCTAACAG CGCGCGCTCG
CAGATGGCAG AGGGATGGTT GCGAGTTCTG AGTAATGGTC AGGTGGTGGC TCTCAGCGCC
GGTACCCACC CACAACCGGT ACATCCATTA GCGATTGCCG TCATGCAAGA GGCAGGCGTG
CCGATCGATC GGCACGTAGC CAAACCAATT GATGCAATTC TCAATCAGAA ACCAGATGTG
ATCGTGACCG TCTGCGATAT TGCCCGTGAA ACCTGCCCGG TCTGGCCGGA AGCGACCCGC
TCCATTCACT GGAGCATTGC CGACCCCGCA GCCGTTGTCG GCAGTGAAGA GGAATGCCGC
GCCGCGTTCG TCGCCGCTCG TGATACGATA CATGAACGGG TACGCGGCTT ACTGGCGCTA
CTCCCACGGT GGTTTGCCGA TCAGTCACCA TCGGCGGTGA GGTAA
 
Protein sequence
MKTPNLSSAF TGLRLLADET RWKLISELRE SDRQVAELVA RTGLAQNLVS YHLHVLRQSE 
LVNTHRSDAD GRVVYYSLSL TALARLLAQV SEELAIPTTP PPSLPHVKVA FLCRANSARS
QMAEGWLRVL SNGQVVALSA GTHPQPVHPL AIAVMQEAGV PIDRHVAKPI DAILNQKPDV
IVTVCDIARE TCPVWPEATR SIHWSIADPA AVVGSEEECR AAFVAARDTI HERVRGLLAL
LPRWFADQSP SAVR