Gene Cagg_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2534 
Symbol 
ID7269380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3089526 
End bp3090986 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content59% 
IMG OID643567360 
Productsuccinic semialdehyde dehydrogenase 
Protein accessionYP_002463841 
Protein GI219849408 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01780] succinate-semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGG CAGTTGAAGG TTCCTTGACA ACCCTTCCCT TTCGATTGCT GATCAACGGT 
GAGTGGCGTG AGGCAGAGAG TGGAGCGACG TTCGCCGTGA CGAATCCGGC TAACGGAACA
GTGCTCGGTT ATGTGCCTGA TGCCGGTGTT GCCGAAACCC GGGCGGCAAT TGCCGCTGCC
GTTGCCGCTC AACCGGCGTG GGCAGCAACT CCGGCCGGTG AGCGAGCAGT GCTGCTGCGG
CGGGTAGCCG CGATGATGCT CGAACGCCAA CAGGAGCTGG CGACGATTAT GACCCTCGAA
CAGGGAAAAC CGTTGGCTGA AGCGCGTGGT GAGATTACCT ACGCCGCCAG TTTTCTCAGT
TGGTTCGCCG GTGAAGCCGA ACGTATCTAC GGCATGACGA TCCCTGCTTC GACGAACGCC
AAACGCATCC TCGTCCTGCG ACAACCGGTT GGTGTCGTAG CACTGATTAC CCCGTGGAAC
TTTCCGAGCG CAATGATCAC CCGCAAGCTC GGACCGGCCC TCGCCGCCGG CTGTACGGTG
ATTGCCAAAC CTGCCGAGCA AACACCGCTT TCAGCGCTGG CTCTCGGTCA ACTCTTTATG
GAGGCGGGTG CTCCTCCCGG CGTCGTCAAC ATTGTCACTT GTCGTGATCC TCGCCCCTTC
GCCGATACAA TCTTCGCCGA TACCCGTGTG CGTAAGATCA GCTTTACCGG TAGTACCGAG
GTGGGCAAAG AGCTAATGCG CCGTTCCGCC GATACGCTCA AGCGAGTGTC ACTCGAACTA
GGTGGCAATG CGCCGTTCAT CGTCTTTGCC GACGCCGATC TCGACGCCGC AGTGCGTGGT
GCTATCGCCT CAAAGTTTCG TAATGCCGGT CAGACGTGTG TCTGCGCGAA CCGGATTTTT
GTCCAGCGCC CCATCTACGC TGCGTTTGCC GAACGGTTCG CTGCTGAAGT GGCACGCTTG
ACCGTCGGTG ATGGGTTACA GCCCGGAGTA CACATTGGCC CCCTCATCGA TGAGCAAGCG
CGCCAGAAGG TGGAACGTCA CATTCACGAT GCCCTCACTG CCGGTGCACG GGTCGTCGTT
GGTGGAGGGC CGGCTCCGCT CGGTGGCAAT TTCTGGTTGC CGACCGTATT GCTCGATGCG
AATACCGATA TGCTCGTCGC TCGTGAAGAA ACGTTTGGTC CGGTGGCTCC GCTGATCCCC
TTCGATGATG AAGATGAGGT GATTCGCAAA GCGAACGATA CGCTCTACGG CCTCGCCGCC
TATGCCTTTA CCCGTGACGT AGGCCGGGTC TGGCGATTGG CCGAGGGTTT GGAATACGGA
ATTATCGGGA TTAATGATCC TATTCCTTCC ACGGCCCAGG CCCCGTTTGG TGGGGTCAAG
CAGAGTGGGA TAGGTCGTGA GGGTGGTCCC ACCGGCATTG ATGAGTATCT GGATATTAAG
TATGTCTCAA TCGGTATCTG A
 
Protein sequence
MTLAVEGSLT TLPFRLLING EWREAESGAT FAVTNPANGT VLGYVPDAGV AETRAAIAAA 
VAAQPAWAAT PAGERAVLLR RVAAMMLERQ QELATIMTLE QGKPLAEARG EITYAASFLS
WFAGEAERIY GMTIPASTNA KRILVLRQPV GVVALITPWN FPSAMITRKL GPALAAGCTV
IAKPAEQTPL SALALGQLFM EAGAPPGVVN IVTCRDPRPF ADTIFADTRV RKISFTGSTE
VGKELMRRSA DTLKRVSLEL GGNAPFIVFA DADLDAAVRG AIASKFRNAG QTCVCANRIF
VQRPIYAAFA ERFAAEVARL TVGDGLQPGV HIGPLIDEQA RQKVERHIHD ALTAGARVVV
GGGPAPLGGN FWLPTVLLDA NTDMLVAREE TFGPVAPLIP FDDEDEVIRK ANDTLYGLAA
YAFTRDVGRV WRLAEGLEYG IIGINDPIPS TAQAPFGGVK QSGIGREGGP TGIDEYLDIK
YVSIGI