Gene Cagg_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2524 
Symbol 
ID7269370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3073053 
End bp3073922 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID643567350 
ProductABC-2 type transporter 
Protein accessionYP_002463831 
Protein GI219849398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.824242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC TGATTGCCAA CCCTGTATTG ACCCGTGAAC TGTTTGGTCG GATTCGTGGC 
CGCAATGCGT GGTGGATTCT CACCGGTTAT CTGACTATCA TCGGTGCGAT TACCCTGCTG
ATCTACGCCG TCTTCGTCAC GTCGGCCAGC TTGAACGATC CCAATACATC AGGAACTATC
GGCAAAACCA TCTTCTTTAC GGTAATGATC GCAGCCTTGA TCCAAGTCTG TTTTCTCTCA
CCATCGTTAA CTGCCGGCGC GATTGTCGGT GAAAAAGAGC GCCAGACCTA CGATCTGTTG
ATGGCCTCAC TCTTATCACC CTGGCAAATT GTGACCGGCA AGTTGATTTC GGCGATTGCC
TTTGCGCTCC TCTTGATAAT GGCCTCATTA CCGATCGCCG GTTTTGCCCT TATCTTCGGT
GGTGTCACGG CCCAAGAGTT GCTGATTGGG GTGGTCGGTC TCTTGGTAAC GGCGGTGAGT
TACGCAGCGA TCGGACTCTT TTGGTCAACG GTGATGCGCT CGACGTTAGG CGCAACGGTG
ACGGCGCAAG GTACCGTGAT AGCCATTCTG TTGCTAGTAC CGTTCCTCTT TTTCGTGATT
TCTACCTTGG TCGGCGCCTT CAACGGTGCG CCAACCCCAC TGTACGTCTA CACTATGGGG
TTATTTCTCT GCCTGCACCC ATTTATCGCG CTCGGTATCA CGGCAACCAG TCTCGAAACG
GGTTCTGGGA TCTGGTTGTG GAGCGTGCCC TCATCGGTGG GTGATTTGAC CGTACCGTCG
CCATGGCTGG TTTACACAGG ACTAGCCTTC CTCATCACCG GTATTGCTCT GGCATCGGCC
ATCCATCGGA TAAAACCGAG CGAAGCGTAG
 
Protein sequence
MSNLIANPVL TRELFGRIRG RNAWWILTGY LTIIGAITLL IYAVFVTSAS LNDPNTSGTI 
GKTIFFTVMI AALIQVCFLS PSLTAGAIVG EKERQTYDLL MASLLSPWQI VTGKLISAIA
FALLLIMASL PIAGFALIFG GVTAQELLIG VVGLLVTAVS YAAIGLFWST VMRSTLGATV
TAQGTVIAIL LLVPFLFFVI STLVGAFNGA PTPLYVYTMG LFLCLHPFIA LGITATSLET
GSGIWLWSVP SSVGDLTVPS PWLVYTGLAF LITGIALASA IHRIKPSEA