Gene Cagg_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2518 
Symbol 
ID7269364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3064719 
End bp3065807 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID643567344 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002463825 
Protein GI219849392 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCA CCATCCGTTC GATTACGGTC ACCCCACTCA ACATTCCGTT GCGCAGTCCC 
TTTGGCATTG CCGGTGGTGT GCAAGAGATT GCCTACAATC TGTTGGTGAC ACTCGAATTG
CAGGGCGGGA TCCGCGGCTA CGGCGAAGCC GCGCCGTTTC CGGCGTTTAA TGGTGAGACG
CAAGCCGGTG CATTGGCTGC TATTGAAACG GTGCGCACGA CGCTTGAGGG TGCCGACATA
CGTGAATGGC GAGCAATTGC CGCACTCTTG CGCGAACGGA TCGGCGATTA TGGCTCAGCT
CGTTGCGCTC TCGAAACTGC CCTCCTCGAC GCACTAACCC GCTTCTATCG CATACCACTG
TACGTCTTTT TCGGTGGCGC CGGTCAGACG CTCGAAACCG ATATGACCAT CACGACCGGT
ACAGTCGAGG CAGCAGCCCT CGCTGCCCTT GACATTCTGG CACGGGGCAT CCGCCAGATC
AAGGTGAAGA TCGGTGGCAG TGATGTCCAG CACGATCTGG CACGGATTAC CGCCATTCGA
GCCGTGGCCC CTGACGCCCC CCTCATTCTC GACGGTAACG GCGGGTTGAC CGCCGAGACA
ATGCTCGAAC TGCTCGGTGC GCTACGCTTG CAACAGATCG TACCGGTCCT CATCGAGCAG
CCGGTGCCGG CAGATGACTG GGTCGGGATG CGCCAATTGG TGCAGTGGGG CGGTAGCCCC
ATCGCCGCCG ATGAGACGGC TACGAGTGCA TTGCGTGTAC TGCGCATTGC TCACGAGCGC
GCCGCCGATG TTATCAACAT TAAACTGATG AAGACCGGCG TGGTCGAGGC GCTTGAGATG
GCAGCGATTG CACGTGCTGC CGGTCTCGGC TTAATGATCG GTGGTATGGT CGAGTCGATC
CTCGCGATGA CGATGTCGGC CCATTTTGCC GCCGGTTTGG GCGGTTTTCG CTTTGTTGAC
CTCGACACAC CTCTCTTTTT AGCCGAAAAT CCATTCCAAG GCGGGTTTCA GATGCGTGGC
GGCGTGATCG ATCTGAGCCA CATTACCGCC GGCCACGGCG TCGAACCGAT AGCGATGGTC
AACGGCTGA
 
Protein sequence
METTIRSITV TPLNIPLRSP FGIAGGVQEI AYNLLVTLEL QGGIRGYGEA APFPAFNGET 
QAGALAAIET VRTTLEGADI REWRAIAALL RERIGDYGSA RCALETALLD ALTRFYRIPL
YVFFGGAGQT LETDMTITTG TVEAAALAAL DILARGIRQI KVKIGGSDVQ HDLARITAIR
AVAPDAPLIL DGNGGLTAET MLELLGALRL QQIVPVLIEQ PVPADDWVGM RQLVQWGGSP
IAADETATSA LRVLRIAHER AADVINIKLM KTGVVEALEM AAIARAAGLG LMIGGMVESI
LAMTMSAHFA AGLGGFRFVD LDTPLFLAEN PFQGGFQMRG GVIDLSHITA GHGVEPIAMV
NG