Gene Cagg_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2513 
Symbol 
ID7269359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3059601 
End bp3060389 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID643567339 
Productprotein of unknown function DUF990 
Protein accessionYP_002463820 
Protein GI219849387 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000318044 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCA AATTTGCCGC TCTTGTGCGG GCCGCATGGG CCGATGCGCT CGCCTATCGC 
GCCCAACTGT TCATCTGGGT AGTTACCGGT ATGCTACCGC TGATAATGTT AGCCGTCTGG
CGTACTATAG CCGGTGATGG TGTCATCGGT GGCTACGCGA GTGATGATTT CGTCGCCTAC
TTTGTCGGTG CGCTCTGTAT TCGTCAATTG ACCGGAGTCT GGATTATTTG GGATATGGAG
CGCGACATTC GCTTGGGTGA GTTATCACCC CATCTGCTAC GACCCATTCA CCCACTGTGG
CGATATTTGG CGATGGCGCT GGCCGATAAA CCTCTCCGCT TGGCGATGGT AGCACCGATT
GCCCTGATCG CATCACTCAT TGCACCTGGC GCGATTCCTC GTCCTGATCT ACTCAGTTGG
GCCATCTTAC CTCTCGCGAT TGTCTTGGCC TTCACCGTCT ATTTTCTTAA CCAGTGCTGC
ATCGGCGTCC TCAGTTTTTG GTGGACGCAG GTCCTCGCAT TGCAGGATTT TTGGTTCGGT
TTGTATGCGT TTAGCAGCGG TTACCTCGTT CCGCTTGATC TCCTGCCACC GCCGGTAACG
GCTGTGCTGG TATGGCTACC CTTCCGCGCC ATGCTGTCGT TCCCGCTCGA ACTCCTGCTA
GGCCGGCTCG ATCCACCGGC GATTGCAGTG GGTCTGGCGC ATCAGATCGG CTGGGCCGTG
CTATTGGGCC TGCTCTTGCG CTGGTTGTGG ACGAACGGGG TATATCGCTA CAGCGCGGTA
GGCGCATAG
 
Protein sequence
MPAKFAALVR AAWADALAYR AQLFIWVVTG MLPLIMLAVW RTIAGDGVIG GYASDDFVAY 
FVGALCIRQL TGVWIIWDME RDIRLGELSP HLLRPIHPLW RYLAMALADK PLRLAMVAPI
ALIASLIAPG AIPRPDLLSW AILPLAIVLA FTVYFLNQCC IGVLSFWWTQ VLALQDFWFG
LYAFSSGYLV PLDLLPPPVT AVLVWLPFRA MLSFPLELLL GRLDPPAIAV GLAHQIGWAV
LLGLLLRWLW TNGVYRYSAV GA