Gene Cagg_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2511 
Symbol 
ID7269357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3055448 
End bp3057232 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content55% 
IMG OID643567337 
Productthreonyl-tRNA synthetase 
Protein accessionYP_002463818 
Protein GI219849385 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0678043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCG ATCCAAAAAG TGATCCCTAT TACCGTCTCC GCCACTCGTT GGCGCATGTG 
ATGGCGCAAG CTGTTCTCGA AATCTTTCCC GATGCCAAAA TCGCCATCGG GCCACCGATT
GAAAATGGCT TTTACTACGA CTTCGACCTG CCGCGTCCGC TGACCCCTGA AGATCTGACC
GAGATCGAAA AGCGGATGAA GCGGATTATT GCCGGCAACC ATCCGTTTAT CTATCGTGAA
GTCACTGCTG AAGAGGCCCG CCAAATCTTT GCCAACCAGC CCTACAAACT CGAATTGATT
GAGGGTTTGG CGAAGGGGCT TGACGAATAC GGTGAGACAC ATCACGGCGA CACTGTCATC
TCAACCTACC GTCAAGATAC GTTCGAGGAT CTGTGTCGCG GCCCACACCT TAACCATACC
GGCGAGATCA ATCCCGAAGC CTTTAAGCTC ATGAGCATCG CCGGGGCATA CTGGCGCGGC
GATGAGAAAA ATCGCCAATT GCAGCGTATT TACGGTACCG GTTGGAATAC CAAAGAAGAG
CTAGAAGCGT ATCTGCATCG TTTGGAAGAG TCCCGCCGAC GTGACCATCG CCGTCTCGGT
AAGGAGCTGG GGCTGTTCTT CTTCTCAGAC GATATTGGTC CCGGATTGCC GATCTTTAGT
CCGAAGGGCG AGATTATCCG CCACGAAATG GAAAAATTTG TGCGTGAGGT GCAAACGCGC
TACGGGTATC AGCACGTATG GACAGGAAAT GTCGTCAAGG AGCAGCTCTA TCGGAAGTCG
GGGCACTACG ATAACTATCG CGATAGTATG TTCCCACCGA TGGTTGAGAG CGAAGACCTC
ATCTTTCGCC TCAAGCCGAT GAACTGTCCG AGCCATATGA CGCTCTACAA CCAGCTTGGC
GTGATCAGTT ATCGCGATCT ACCGCTGCGC TTTGCCGAGT TTGCTACACT CTACCGTTAC
GAAGACAGCG GCGCGTTGAG CGGGTTGACG CGCGTGCGGG CATTGACCCA AGACGATTGC
CATATTTTCT GCCGACCCGA TCAGATTCAA GAGGAGTTTA GTCTTGCCCT GCAAGTGATC
CGCGAGGTGC TGGGAACGTA CAAGTTTACC GATTACAAGG TGCGCTTGTC GTTGCGCGGC
AAGGAGGGCA AGTACGTGCA AGATGATGAG AAGTGGGAAC TGGCGACGGC CGCCTTGCGT
GCTGCACTTG AAGCTAACGG TGTTGAGTAT TTTGAGGCCG AAGGCGAAGC AGCGTTCTAT
GGTCCCAAAG CCGATTTTCT GGCCCGTGAT GTGTTGGGGC GCGAATGGCA ATTGAGCACT
ATCCAGGTCG ACTTCATCCA ACCGGCACGC TTGGGCTGCG AATATATCGG CGAAGACGAC
AAACCGCACA CACCGGTCGT CTTGCACCGG GCCGTCACCG GAACAACCGA GCGGTTTATG
GGCATCCTCA TCGAGCACTA CGCCGGTGCA TTTCCGCTTT GGCTCGCACC GGTGCAAGCG
GTGATCATTC CCATTACCGA CAAGCAGATG GAATATGCGC GCAAGGTGCG TCAACGCCTG
TTTGCCGCCG GCTTGCGTGT CGAACTCGAC GAGAACCGTG ACCGGATGCA AGGTAAGATC
CGGCGGGCAC AGTTGCAGAA GATACCGTAT ATGCTTATAA TCGGCGCCAG AGAGGAATCT
GCTGATGCAG TTGCTGTGCG CACCCGCGCC GGTGACGACC TTGGCGCGAT GCCGGTCGAG
GCATTTTTGG CTCGCGCCCT TGAAGAAATC CGCACCCGCA GTTGA
 
Protein sequence
MPVDPKSDPY YRLRHSLAHV MAQAVLEIFP DAKIAIGPPI ENGFYYDFDL PRPLTPEDLT 
EIEKRMKRII AGNHPFIYRE VTAEEARQIF ANQPYKLELI EGLAKGLDEY GETHHGDTVI
STYRQDTFED LCRGPHLNHT GEINPEAFKL MSIAGAYWRG DEKNRQLQRI YGTGWNTKEE
LEAYLHRLEE SRRRDHRRLG KELGLFFFSD DIGPGLPIFS PKGEIIRHEM EKFVREVQTR
YGYQHVWTGN VVKEQLYRKS GHYDNYRDSM FPPMVESEDL IFRLKPMNCP SHMTLYNQLG
VISYRDLPLR FAEFATLYRY EDSGALSGLT RVRALTQDDC HIFCRPDQIQ EEFSLALQVI
REVLGTYKFT DYKVRLSLRG KEGKYVQDDE KWELATAALR AALEANGVEY FEAEGEAAFY
GPKADFLARD VLGREWQLST IQVDFIQPAR LGCEYIGEDD KPHTPVVLHR AVTGTTERFM
GILIEHYAGA FPLWLAPVQA VIIPITDKQM EYARKVRQRL FAAGLRVELD ENRDRMQGKI
RRAQLQKIPY MLIIGAREES ADAVAVRTRA GDDLGAMPVE AFLARALEEI RTRS