| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2501 |
|---|
| Symbol | |
|---|
| ID | 7269347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3045634 |
|---|
| End bp | 3047238 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643567327 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002463808 |
|---|
| Protein GI | 219849375 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC TCGACCGTGT CAGCTACACC TACCCCGGTG CCACCACTCC CATCTTCCGC
CAACTGAGCC TCCATATCGC ACCGGGCGAG TTTCTCCTGA TCTGCGGACC GAGCGGAGCC
GGCAAAAGCA CGTTGCTCCG TCTCCTCAAC GGCCTCATCC CACACTTCTA CGGTGGTACA
TTCGGGGGAC GTGTCCGAGT GTGGGGCCGC GACACGTTAA CCCACCAGCC CCGCGATCTA
GCCGACCTAA TCGGCTTTGT CGTTCAAGAC CCCGAAAGTC AGTTTGTCGT CGAGCGGGTC
GAAGACGAAA TCGTCTTCGC TATGGAAAAC CTGGGTGTCC CCACACCGGT TATGCGCCGA
CGAGTCGAAG AGGTACTCGA TCAACTAGCG ATAGCCCACC TACGACATCG TCACGTAGCA
ACCCTTAGCG GCGGCGAACA GCAGCGCGTC GCCATTGCCG CAGCACTAGC CGCCCAGCCG
CGAGCATTAG TCCTCGACGA ACCAACCAGC CAACTCGATC CACATGGAGC AGAAGAGGTC
CTAACCGCGT TGCAAAAACT GAACGCCGAT CTCGGCATTA CCATCATCTT ATGCGAGCAT
CGGCTGGAAC GAGTCGTACA ATACGCCGAC CGTATCCTCT ATCTTACACC GAATGGCCAA
TACGAAGTAG GCACACCGCG TGAGGTACTA TCCCGCATTG AACTACGTCC ACCGTTACAA
CATCTCGCCA CAGCATTAGG CTGGGAACCA CTCCCATTGA CGATTAAAGA AGGGCGAAGA
TTTGTTCCCA CCAATCTACC GGCGCCACCA CCTACCCCTC CCGTATCGCC ACCTGCTCCA
CCGCTTGCCC GCCTACGCAA CGTCACCGTC CAATATGGTC AGCACGAAGC GCTCTATCGC
GTAAACCTCG ATCTGCCATA CGGTACACTC ATTGCCCTTA TGGGACGGAA CGGCAGTGGC
AAAAGCACCT TACTCAAAAC CCTCATCGGG CTAGTCCGTC CAACCGAAGG CAAAATCGAG
CTAGAAGGGC GTGACATTGC GCCACTTACC GTCGAGGAAC TCGCCCGCAC GGTCGCATAC
GTCCCGCAAG ATCCGCATAG CATCCTCTTC CACGACACCC TCCACGAGGA GCTAGCGTTT
AGCCTACGCG GTCGCGGCTT ACCACCGTCA CCAACGCTGA TCGACACCAC ACTGCGCAAA
TTCGGTATTG CCCATCTCGC CACCCACTAT CCGCGCAATC TCAGCGGTGG TGAAGCGCAA
CGTGCCGCCT TAGCGACGGC GCTAGTCGGA GAACCACGTC TGATCTTGCT CGATGAACCG
ACCCGCGGTT TGGATTATCA AGCCAAAACC ACCCTCATAA CCTTATTGCG CCGGTTGTGT
AGCGAGGGTC GTACCGTTGT GATAGCAACT CACGATGTTG AGATGGCTGC CGCCTGCGCC
GACCGGGTTA TCCTGCTCGG TGAAGGTGAG GTAGTAGTCG AAGGGCCGGC TACTGAGTTA
CTCGGCGACA GCTTGCTCTT CTCATCGCAG GTCGCCAAAC TCTTTCCCGG CTACGGCTGG
CTAACAGTAG CCCAAGCCTT GGCCGGCCTC GGCAAAACAG CCTGA
|
|---|
| Protein sequence | MIELDRVSYT YPGATTPIFR QLSLHIAPGE FLLICGPSGA GKSTLLRLLN GLIPHFYGGT
FGGRVRVWGR DTLTHQPRDL ADLIGFVVQD PESQFVVERV EDEIVFAMEN LGVPTPVMRR
RVEEVLDQLA IAHLRHRHVA TLSGGEQQRV AIAAALAAQP RALVLDEPTS QLDPHGAEEV
LTALQKLNAD LGITIILCEH RLERVVQYAD RILYLTPNGQ YEVGTPREVL SRIELRPPLQ
HLATALGWEP LPLTIKEGRR FVPTNLPAPP PTPPVSPPAP PLARLRNVTV QYGQHEALYR
VNLDLPYGTL IALMGRNGSG KSTLLKTLIG LVRPTEGKIE LEGRDIAPLT VEELARTVAY
VPQDPHSILF HDTLHEELAF SLRGRGLPPS PTLIDTTLRK FGIAHLATHY PRNLSGGEAQ
RAALATALVG EPRLILLDEP TRGLDYQAKT TLITLLRRLC SEGRTVVIAT HDVEMAAACA
DRVILLGEGE VVVEGPATEL LGDSLLFSSQ VAKLFPGYGW LTVAQALAGL GKTA
|
|---|
| |