Gene Cagg_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2493 
Symbol 
ID7269339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand+ 
Start bp3033020 
End bp3033655 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID643567319 
Productputative transcriptional regulator 
Protein accessionYP_002463800 
Protein GI219849367 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0117208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.769487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGG TTGAGCGCAG AGAACAGGGA GCGACACGGC GCAGCATCTT GCAGCTCCTG 
CGCCGGCATG GGCAGATGAG TGCGGTAGAA CTAAGTGCTG CACTTGACAT CGGGGCTGTT 
GGGATTCGCC AACACCTTGC CGCACTCGAG CGCGAGGGTC TCGTCTACAT TTGTGGTCTG 
CGCCGAAACG TAGGTCGTCC GGCGCATCTC TATGCGCTCA CCGAGCGCGC AGAACGTTTT 
TTTCCCAAAC ACTACGAACG TTTGGTCTGC GAGCTGTTCG AGAGTGTAGC CGCGATGGGT 
GGTGAGGTTG CGGTGCAGCA GGTGCTGGAA CAGCGACGAA ACGCCTTAAA CGCCACCCTT 
GCCCCCCAAC TTGCCGGTAA GTCGCGGGCG ACGCAAGTTG CGATCTTGGC CGAGCAGCTT 
GCCGAACAGG GGTATATGTG CGAATGCGAA CAGCTTGAGA ACGGCGATCT TTTGATGACG 
CAGTACAATT GCCCCTTCGA TTGTGTTGCT CGTCGTTTCC CTCAGATTTG CGATCAAGAA 
CTACGCCTCT ACGAAGACCT ACTTGCCACA CCGATCGAGC GTGATATGAC GATTGCCGAG 
GGTGGGCATT GTTGCCGCTA TCGTATTCCG GGGTAG
 
Protein sequence
MHKVERREQG ATRRSILQLL RRHGQMSAVE LSAALDIGAV GIRQHLAALE REGLVYICGL 
RRNVGRPAHL YALTERAERF FPKHYERLVC ELFESVAAMG GEVAVQQVLE QRRNALNATL 
APQLAGKSRA TQVAILAEQL AEQGYMCECE QLENGDLLMT QYNCPFDCVA RRFPQICDQE 
LRLYEDLLAT PIERDMTIAE GGHCCRYRIP G