Gene Cagg_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2477 
Symbol 
ID7269323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3012876 
End bp3013409 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID643567304 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_002463785 
Protein GI219849352 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.279719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.48758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAA TACGTATTGC GACCATCTGG TTAGGTGGCT GTTCGGGCTG TCATATGTCA 
TTGCTCGATC TCGATGAATG GCTGATTGAG CTAGCAGCCC AGGCCGATCT TGTGTACAGT
CCGATCGCCG ATGTCAAACG ATTTCCGTCT CATGTTGATG TCACGTTGAT CGAGGGAGCC
ATCGCCAATA ACGAACACCT CGAACTGGCG CATATTGCCC GCCGTAACAG TAAGATTATC
GTCTCTTTCG GTGATTGCGC TGTGAGCGGG AATGTTACTG CGCTGCGTAA TCCGCTTGGT
TCCCCCGAAC AGCTTCTACA ACAGGTCTAC ATCGAACATA GCGACCCACG CGGGAAGATA
CCTCACGAGC CGGGTATTGT GCCGGTGCTC CTCGATAAGG TGATGCCGGT TCATCAGGTC
ATCCCCGTGG ACTATTATCT GAGCGGCTGC CCACCATCGG CCCCCCGGAT TCGTGCCTTA
CTCGAGGCGT TGCTCACAGG CCGCAAACCG GAAGTTGATA TTCGATTTGG ATAG
 
Protein sequence
MSRIRIATIW LGGCSGCHMS LLDLDEWLIE LAAQADLVYS PIADVKRFPS HVDVTLIEGA 
IANNEHLELA HIARRNSKII VSFGDCAVSG NVTALRNPLG SPEQLLQQVY IEHSDPRGKI
PHEPGIVPVL LDKVMPVHQV IPVDYYLSGC PPSAPRIRAL LEALLTGRKP EVDIRFG