Gene Cagg_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2427 
Symbol 
ID7266150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2945744 
End bp2946955 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content56% 
IMG OID643567253 
ProductABC-type branched-chain amino acid transport systems periplasmic component-like protein 
Protein accessionYP_002463736 
Protein GI219849303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAA GAAGACGGAC GGTTGGTTGG TTGGTGGTGT TGGCCGTGTT CGCGACCTTG 
CTAGCTGCCT GTGGCGGTGG TGGCGGAGCT GGGACTGGTG GGGGTGCGAG CAGTGAGCCG
ATCCGGGTAG GTGCGATCTT CGATTTGACC GGTGCAACGG CAGACGTTGG TACGCCTTAT
GCGCGTGGAC AGATTGCCTT TATTGACTGG AAGAATGAGC AGGGTGGTAT CAACGGTCGG
CGTTTGCAAC TGTTCAGTGA AGACTATGCC TATCAGGTGC CGCGGGCGGA AGAGCTGTAT
ACCAAGTTTG TAACTCAAGA CAAAGTTTTG GTCTTCTCAG GTTGGGGAAC CGGTGATACC
GAGGCGCTGC GCCCCAAGAT TACCGAAGAC AAGATTCCAT TCATCTCGGC TTCGTATTCG
GCAACGCTCG CCAATCCGGC CGAAACGCCG TACAACTTCC TCGTGGCTCC CACCTATTCC
GATCAATTGA TTATCGCGAT GAAGTGGGCA ATTGAGGATT GGAAAGCGAA GGGGAACAGT
GGCCTGCCGA AATTCGGCTA CCTGATCAAC GATAGCCCGT TTGGTCGCTC GCCACTGGCC
GATGGGACGG CGTTTGCGAC CTCGCAGGGG ATCGATACGC CGCTTGAGGT GCCATCGCCG
CGTGGTGCAA CCGACCTCAC ACCGCAGTTG ACCCAGCTTC GCGACTATGG CGCGAACTAC
ATCTTCTTGC AAAATGTGTC AAGCCCGGCG GCGCTGGCGA TCAAGAATGC CAAGAGCCTT
GGCTATGACG TGCAGTTTGT CTGCCTGAAC TGGTGTGCTA ACGAGATTTT GATCAAGTTG
GCCGGAGCCG ATGCTGAAGG TGTGGTCGGT GCGGTGCCGT TTAACCACGA GTCGGAGGGT
GGCAAGATTG CGCTCGAATA CGCGAAGGCG AAGAATATCG ACTATGGTGG CGCCGATAGC
ACCTTTGTGC AGGGCTGGAC GGCGATGTCG ATTCTGATCG CCGGGATCGA GAAGGTTGTG
GCTGATGGCA AAGAATTGAC CGGTGAGAAC ATCAAGGCAG CGCTTGAGAC GATGGGCCAG
ATCGATACCA AAGGTGTGAC GCTGCCGGTG CAGTTTAGCT CTACCGATCA TGCCGGCGTC
AAGTCGCTCA AGATGTTCCG GGTTGAAAAC GGTAAGTGGG TGCCGATCAC CGACTTTATT
AGCTCACGGT AG
 
Protein sequence
MVRRRRTVGW LVVLAVFATL LAACGGGGGA GTGGGASSEP IRVGAIFDLT GATADVGTPY 
ARGQIAFIDW KNEQGGINGR RLQLFSEDYA YQVPRAEELY TKFVTQDKVL VFSGWGTGDT
EALRPKITED KIPFISASYS ATLANPAETP YNFLVAPTYS DQLIIAMKWA IEDWKAKGNS
GLPKFGYLIN DSPFGRSPLA DGTAFATSQG IDTPLEVPSP RGATDLTPQL TQLRDYGANY
IFLQNVSSPA ALAIKNAKSL GYDVQFVCLN WCANEILIKL AGADAEGVVG AVPFNHESEG
GKIALEYAKA KNIDYGGADS TFVQGWTAMS ILIAGIEKVV ADGKELTGEN IKAALETMGQ
IDTKGVTLPV QFSSTDHAGV KSLKMFRVEN GKWVPITDFI SSR