Gene Cagg_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2426 
Symbol 
ID7266149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2944663 
End bp2945721 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content53% 
IMG OID643567252 
Productinner-membrane translocator 
Protein accessionYP_002463735 
Protein GI219849302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGTG GAACCTTTCA TACCACCTAT GCCAGTGATG TGAGTCTGCG TCCGTATTGG 
CCGCAGCGGA TTCGGATTGT GCTGGTACTG GTGCTGGCCT TGATATTTCC TTGGTTTGCC
GATCGGTATT GGCTCAATCT GGCGAATACG ATAGCCATCG CTGCAATTGG CGCAATCGGG
TTGAATATTC TGGTTGGGTA TACTGGGCAG ATCAGTATCG GTCATGGCGG ATTTTTGGCC
GTCGGTGCGT ATATTGCCGG TCTGATGGCC GTCCATTTGG GTACACCGAT GTGGCTGACG
ATTCCGGTTG CCAGTTTTTT TACGGCAGCG GTTGGGGCTT TTTTTGGCTT GCCATCGCTG
CGTCTGAAGG GGCTATATCT TGCGATTGCT ACCCTTGCCT CGCAAGAGAT CATCATCTGG
CTGCTCACCC ACGGGAAGCT GCTGGGAATC GGTGAGTCGT TGACGTTGCC GCGGGCAAGT
AATAATCTGT TCGGTTTACC GATGGAGTGG CTGGGCAACA ATGACTTTGC CTTCTATTGG
GTGTGTCTGA TCTTGTTGAT CGGGACCGTT ATCTTCGTCA GTAATCTCTT TCGGACACGT
GCCGGACGGG CGTTTGTGGC GATCCGTGAC CAAGACATCG CTGCGCAGGT GATCGGGGTT
GATCTGTTTC GGTATAAACT GTTGGCGTTT GCCACCTCGT CGTTTTTCGC CGGTTTGGCC
GGTGCGCTCA CTGCGCACTA CCGTGGTGTT ATCTCATGGG AGCGTTTCAC TATCGACACC
AGTATTCTGT ACCTCGCCAT GATTATCATC GGCGGGCTAG GGAGCGTCTC TGGTTCGATC
TACGGGGCAG CCTTTATGAC GCTCCTGCCG GCGTTGCTCT CGAATCTGGC CCGTGCCCTC
AGCGATGTCG TGCCAAATAT TAATTCATAC CTACCGTATA TGCAGCAGGG TGCGTTTGGT
CTTGCGATCA TCCTCTTCCT CATCTTCGAG CCGGAAGGCA TTGTGAAGAT GTGGCGCAAC
GTCAAAGATT ACTTCAGGCT GTGGCCGTTC AGTTATTGA
 
Protein sequence
MQSGTFHTTY ASDVSLRPYW PQRIRIVLVL VLALIFPWFA DRYWLNLANT IAIAAIGAIG 
LNILVGYTGQ ISIGHGGFLA VGAYIAGLMA VHLGTPMWLT IPVASFFTAA VGAFFGLPSL
RLKGLYLAIA TLASQEIIIW LLTHGKLLGI GESLTLPRAS NNLFGLPMEW LGNNDFAFYW
VCLILLIGTV IFVSNLFRTR AGRAFVAIRD QDIAAQVIGV DLFRYKLLAF ATSSFFAGLA
GALTAHYRGV ISWERFTIDT SILYLAMIII GGLGSVSGSI YGAAFMTLLP ALLSNLARAL
SDVVPNINSY LPYMQQGAFG LAIILFLIFE PEGIVKMWRN VKDYFRLWPF SY