Gene Cagg_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2418 
Symbol 
ID7266141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2936966 
End bp2937301 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content55% 
IMG OID643567244 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463727 
Protein GI219849294 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.217831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.711574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCG AGCAAGTAGA CGATGTGCTG ATTATTCAGC TTCCCGCCCG ACTGGACGCT 
GCGGGCGTGG CAGCGATTGA GTCGGATTTA GCATCAACCA TCACCGGCCA CGGCGGTAAG
GTTCTAGCCG ATATGACAAA CGTCAACTTT GTCGCCAGTT TGGCCCTGCG TATGCTGCTG
AGCAACCTCC GCGCAATCCA ACCGCTCGGA GGTGATTTGC GCCTTTACGG TTTACAACCG
CAAATCGCCG AAATCTTTCG CAAAAGCCGG TTCGATACCC TCTTCAAAAT CTACCCCGAC
CGCGAAACAG CGCTGGCAGC CTATCGTAAT CGGTAA
 
Protein sequence
MNTEQVDDVL IIQLPARLDA AGVAAIESDL ASTITGHGGK VLADMTNVNF VASLALRMLL 
SNLRAIQPLG GDLRLYGLQP QIAEIFRKSR FDTLFKIYPD RETALAAYRN R