Gene Cagg_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2415 
Symbol 
ID7266138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2932682 
End bp2934013 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content58% 
IMG OID643567241 
Productpeptidase M20 
Protein accessionYP_002463724 
Protein GI219849291 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000169813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.04859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCC ACGCACCGCC ATCAACAGAA CAGCTTGTCC GGGTGTTGCG CCATCTCTGT 
CGGCAGCCAT CGACTACCGG CCAGCCCGAT GAGTTGCGCA CTGCTGCCGA ACATATTGCG
TTCCTTATCC GTTTGCTCGG CATGCAGGTG CGGATTGTTA GCTCGTCACC TGCACCGGTG
ATCATCGCTC ATCGCGTCGG TTGTCGCCCA CAAACCCTCT TGCTGTACCA CTATTACGAT
ACACCACCGA CCGGTCCGTG GCGCTACTGG TCATCGGAAC CATTTGAGTT GGCCGAGCGG
GATGGACAAA TGTTTGGACG AGGTGTAGCC GGTGGTAAAG GGGCACTGGC TGCGCATCTG
GCTGCGTTGC AAGCTGTGGT GCAACGCGAA GGTGATTTGC CGTGTGGGGT GACCCTGGTG
ATAGAGGGTG CCGCCAACAG CGGTAGTCCG GGATTAGCCG AAGCGTTACG TTCGCACGCC
GATCTCCTGC AATGTGACGC GGTGCTGGCC AGTATTGGCG ATCGTGACGC GAATGGGATA
CCAATTTGTG TTAGTGGTAG TAAAGGATGG CTCCGGCTAC GCCTTCTCGC CCGTGGTCCA
GCGTACCCCT TACCGGCCGG GTTTGCTACT AGTGTTGCCA ACCCACTCTG GCGCTTAATT
TGGGCATTGG CTGCGCTGAA AGGCGACGAT GAAGACGTGC GTATCGAAGG GTTCTACGAT
GCAGTTGAAG GTCCATCGCG TGCCGATAAT GCGATGATTC GGCAGTTGCA ACTCGCTTCT
GGCGCGCGTC GCCAGGCCTG GCAGATCGAT CAATTTCTCT TTGGTATCGA TGGTGCAGCC
TTGAGCCGGT CGGAGGTGAC GCTGCCAACG TGCAATGTGA GCGCACTGAC GGTTGAGCCA
CACCATGATT TGCCGGGTAT TCCATCGGCT GCAATAGCGT TGCTTGATCT GCAACTGGTG
CCGCGCCAAC AGCCCGATGC CGTCACCGAG CTGATACGGC AGTTTCTCCA TGAGAAAGGT
TTTGGCGATG TGACCATCGA ACGTCTGCCT GGTGGCTATG CGCCATGGGT GACGGCAACC
GATAATCCCT TTGTTAGCCG GGTAGCCACT ATTGGTGCGA CAGTATTTGA ACGTCCGCCG
GCAGTTGTCC CTGCCGGCCC CTATCCCATC CCGTTTAGTG TGTTGACCGA GGTGCATCCG
GTGCCTACGG TGAGTATCGG CTTTACCCCG GTAGAGAGTA CCGTTTTTGC CCCGAATGAG
CATATTGCCC TCGCCGACCT TAGTCGGCAC AGTCAGCTGT TGATCGAGTT GCTCGACCGA
TTGTGGGTCT AA
 
Protein sequence
MTIHAPPSTE QLVRVLRHLC RQPSTTGQPD ELRTAAEHIA FLIRLLGMQV RIVSSSPAPV 
IIAHRVGCRP QTLLLYHYYD TPPTGPWRYW SSEPFELAER DGQMFGRGVA GGKGALAAHL
AALQAVVQRE GDLPCGVTLV IEGAANSGSP GLAEALRSHA DLLQCDAVLA SIGDRDANGI
PICVSGSKGW LRLRLLARGP AYPLPAGFAT SVANPLWRLI WALAALKGDD EDVRIEGFYD
AVEGPSRADN AMIRQLQLAS GARRQAWQID QFLFGIDGAA LSRSEVTLPT CNVSALTVEP
HHDLPGIPSA AIALLDLQLV PRQQPDAVTE LIRQFLHEKG FGDVTIERLP GGYAPWVTAT
DNPFVSRVAT IGATVFERPP AVVPAGPYPI PFSVLTEVHP VPTVSIGFTP VESTVFAPNE
HIALADLSRH SQLLIELLDR LWV