Gene Cagg_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2414 
Symbol 
ID7266137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2931560 
End bp2932525 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID643567240 
Productcytochrome oxidase assembly 
Protein accessionYP_002463723 
Protein GI219849290 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0989704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.228946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAC GACACCGTGC ATTTGTCAAC TTTGCGTGGC TGAATGTCGG CTACAACTTG 
CTGGTGATTC TGTGGGGTGC GTTTGTGCGG GCCACCGGTT CAGGGGCCGG CTGCGGCGAT
CACTGGCCGT TATGCGATGG TCAAGTCATC CCACGTTCCC CTGATGCAGC CCAACTGATC
GAGTTTTCGC ATCGGGTGAC GAGTGGTATT GCCCTTCTCT TAGTGATCGC CCTACTGGTC
TGGGCCTTAC GTTTGTTTGC TGCCGGCCAC CCGGCACGAC GCGCTGCCAT TGCTGCAATG
GTGTTCATGA TTATCGAATC GCTGATCGGT GCGGCATTGG TGCTGTTCCA ATTGGTTGCT
CACAACGCTT CGCTGACACG CGCACTCTCC CTCGGTCTTC ACTTGGTGAA CACGCTCTTG
CTCATTGGGT CGATTGCCCT GACTGCATGG TATGCGAGTG GTAAACCGGC TCCTGAATTG
CGCGGTAAAG GGAGGCTGTT GGCAATGCTG ATAGCTGCCC TCGTGGGCAC GGCAATCGTC
GGTTCGAGTG GTGCAGTGAC CGCCCTTGGT GACACCCTGT TACAGTTGGG GGTTTTACCC
GGCGGTGTCT CCCAACCGAT CAACCGTGAT AGTCATCCGC TCGTGTTGAT GCGTATTATT
CACCCGGTAC TTGGCACACT GGTCGGGTTG GCGATGATCT CACTTGCCCA ACAAGCAATA
CGCTATGACC CCTCGCCAAC GACGCGGCGA CTGGCATGGA TAACGGCAAC GATCTTTGTT
GGCCAAATCT TCTTGGGTGC GCTGAACGTA ATCCTTAAAG CACCGGTTTG GATGCAGTTG
GTGCATCTGC TCTTTGCCGA TCTGGCATGG TTGGCCCTGG TGCTGCTGGG AGCAACGTTG
TTAGGCCGAC CTGGCACCGT CGTGGTCACA CAATCACCGG TCATCTCCAG TTCGCCGGCA
CGCTAG
 
Protein sequence
MDSRHRAFVN FAWLNVGYNL LVILWGAFVR ATGSGAGCGD HWPLCDGQVI PRSPDAAQLI 
EFSHRVTSGI ALLLVIALLV WALRLFAAGH PARRAAIAAM VFMIIESLIG AALVLFQLVA
HNASLTRALS LGLHLVNTLL LIGSIALTAW YASGKPAPEL RGKGRLLAML IAALVGTAIV
GSSGAVTALG DTLLQLGVLP GGVSQPINRD SHPLVLMRII HPVLGTLVGL AMISLAQQAI
RYDPSPTTRR LAWITATIFV GQIFLGALNV ILKAPVWMQL VHLLFADLAW LALVLLGATL
LGRPGTVVVT QSPVISSSPA R