Gene Cagg_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2408 
Symbol 
ID7266131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2927357 
End bp2927815 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID643567234 
ProductCheW protein 
Protein accessionYP_002463717 
Protein GI219849284 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.492759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.123205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGT CAACGCAAAC CGTTTCGTAC AAAGAATATC TGCTTTTTCG CCTTACCAAC 
GAACTGTACG CTCTCCCCGG AAAAGCGGTG CGCGAGGTAA TGCGTTGGCA TACACCAACA
CCGATACCGG GCGCACCACC GCTCCTGCCC GGTTTACTCA ACCAACGCGG TCAGATTCTA
CCGGTGATCG ATCTACGACT CTTACTCGGT TTGCCTGCGA CGGCACCCGA TCGGGCGACA
CGCCTCATCT GGGTACATCA GGATGACATC GATGCCGCAT TGCTGGCCGA TGCCGTCGAT
GATCTTATTG CAATCGAGCC CTCCCTCCTC GAACCACCAC CGGCCCACCT CACCGGCCCG
GCCCAACGAG TGATTCACGC CGTCTTTCGT TATCAAGAGC AGCCTGTAGC CTTACTCGAT
CCGGCTGCCG TTTTTGCCTT TGTTAAGGAG GCTGCGTGA
 
Protein sequence
MQPSTQTVSY KEYLLFRLTN ELYALPGKAV REVMRWHTPT PIPGAPPLLP GLLNQRGQIL 
PVIDLRLLLG LPATAPDRAT RLIWVHQDDI DAALLADAVD DLIAIEPSLL EPPPAHLTGP
AQRVIHAVFR YQEQPVALLD PAAVFAFVKE AA