Gene Cagg_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2401 
Symbol 
ID7266124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2919183 
End bp2920313 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content58% 
IMG OID643567227 
Productprotein serine/threonine phosphatase 
Protein accessionYP_002463710 
Protein GI219849277 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.151226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC GTAACGGTCA CGTACTACCT ATGCTACTGA ACCGTCGCCG GTCATGGCCG 
AGCTTGCTGG CCCATCGCCA GCGCAATCTC GTTGGTGTAC GGCGGCATGT CGCACCTCCT
GCCGCCTCCC CTCCACCACC TGCTGCACCG GCTATGGACG AGGCAGCGCA GCAGCGGGCA
CGTGAGATCG AGCAAGAATT ACAATTAGCC CGCGATATTC AGCAGGGCTT GTTACTCGAA
GCTGCTCCGC ATCTACCCGG TTGGGAAGTC ACTGCTATCT CGCTACCGGC ACGCGATCTC
GGTGGCGATC TGTACGACTT CTTACCGCTC GCCGATGATC GGCATGGCAT CATGATCGGT
GATGTCAGTG GAAAAGGCCT CCCTGCTGCC CTTCGGATGG CCGTGGCGCG CACCGTCTTT
CGCCACGAAG CACGTCGCAA CACCGACCCG GCCACTACCC TCGCCGCCGT GAATCAGGGT
GTATTAAGCG AGATTCCGCA CGGTATGGTC ACCATGCTCT ATTTACAGCT CGAGCCACGC
ACCGGACAGT TATGCTTCGC CAACGCCGGT CATACCTTCC CGTTATTAAT TTCCGATACC
GTGCAAGAAC TCGAAGTTGC CGGACTACCG CTCGGTATTG ATAGCGAAAG TGAATACGTG
CAACAGCAAG CCATCATTGC TCCCGGCGAA AGTTTATTGC TCTACACCGA CGGTCTGATC
GAAGCCGAGA GTCCGAACGG TACGATCTTT AGCTTCGAGC GCCTCGTTGA TCTGATCGTA
GCTCACCCCC AACGTAAACC ACGCGCCCTT GCCGCCGCAC TTGTCCATGA AGTGCGCTCG
TGGACGAACG GCATCCTGAG CGATGACGTT ACGATGGTTA TCCTACGCCG ACGACTACTC
GATCTGGTCA CTGAAATCCG CAGCGTGATC GCCGATGTGA TCGGTATCGA GCGCGTCGAT
ATGCTGTGGG AAACTCTGTT TGCCGGTGAT ATACCGACCA CCGTCGAAGA ATGGCGTGAA
GCGTTACCCC GTTTACAACC CCTCGCACAA ACGTCGCTCG GTCGCGGCCT TGCGCGTGAG
CTGATCCAGC AAATCCGCCT CACACTCGAT GATTATCGCG CGATCTGCTG A
 
Protein sequence
MPARNGHVLP MLLNRRRSWP SLLAHRQRNL VGVRRHVAPP AASPPPPAAP AMDEAAQQRA 
REIEQELQLA RDIQQGLLLE AAPHLPGWEV TAISLPARDL GGDLYDFLPL ADDRHGIMIG
DVSGKGLPAA LRMAVARTVF RHEARRNTDP ATTLAAVNQG VLSEIPHGMV TMLYLQLEPR
TGQLCFANAG HTFPLLISDT VQELEVAGLP LGIDSESEYV QQQAIIAPGE SLLLYTDGLI
EAESPNGTIF SFERLVDLIV AHPQRKPRAL AAALVHEVRS WTNGILSDDV TMVILRRRLL
DLVTEIRSVI ADVIGIERVD MLWETLFAGD IPTTVEEWRE ALPRLQPLAQ TSLGRGLARE
LIQQIRLTLD DYRAIC