Gene Cagg_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2398 
Symbol 
ID7268750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2916504 
End bp2916830 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID643567224 
Productanti-sigma-factor antagonist 
Protein accessionYP_002463707 
Protein GI219849274 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.460172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA TTATTCGACG AGAAGAGTTT GGTGATGTGG TCGTCCTCCA CATCTTGACG 
ACCAGTGTTG ATGCTATCTC GGCTGCTGCC ATTGCTGCCG AATGCCAAGA GATGCGTCCG
ATTACGGTAC TTGATTTTAG CGAAGTATCG TTTATCAATT CGGCCGGCAT TTCGGCGTTG
CTCAAATTCG TCGTGAATGC CCGTAAAGCT GGCTACCAAT TGTATGCGAT GAATGTCACA
CCACACCATC AGAAAATCTT TAAGATGGTT GAGATGTCGC GTTATATGCC GACCATCGAA
GAGCGAGATC TGGCTGCATA TCGCTGA
 
Protein sequence
MSDIIRREEF GDVVVLHILT TSVDAISAAA IAAECQEMRP ITVLDFSEVS FINSAGISAL 
LKFVVNARKA GYQLYAMNVT PHHQKIFKMV EMSRYMPTIE ERDLAAYR