Gene Cagg_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2383 
Symbol 
ID7268735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2898412 
End bp2899389 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content55% 
IMG OID643567210 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463693 
Protein GI219849260 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGC CGGCAAATAC CTTGACTAAT CCGATCGATC TACAAGCACT GCAGACCAAA 
CCACGCAGTC TGTGGTCAGA TGCATTCCAC CGGCTGCGAC GCAATCGGGC CGCCATGGTT
GGGTTGGTGG TCATTATCCT GTATGTGGTG GTAGCAGTGA CCGCACCCTG GTTGGCACCG
TATAATCCGG TGCAACAGAT CCCGAATAAT AGCCTGCGTC CACCTGCGTG GGTAACCGAT
AATCCCGCCC GAATGGGCGT CCCCGAACAC CTCCTCGGTA CCGACACACT TGGCCGCGAT
GTGTTATCCC GCCTGATGTA CGCTATCCGA GTGTCACTGA TCGTTGGTGT CGTGCCACAG
GTGGCAATTT TGCTGATCGG TGTCACTATC GGTTTGATCT CAGGATTTGC CGGTGGCTGG
CTCGATAACC TGCTGATGCG CTTTACCGAG ATCGTTGCTT CATTTCCCGA TTTACTCTTC
ATTATCGCAC TCTCGACCGC TTTCCGCGAA ACATGGTTGG GCCGAACATT TAATGGCTTA
CTCCTAATCT TTATCGCTGT TTCGCTGGTG AGTTGGACGG GAATTGCCCG CCTCGTGCGC
GGACAAGTGT TGTCACTGAA AGAGAAGGAG TTTATCGAAG CGGCACGGGC CATCGGGGTG
CCCACCGCCA CGATCTTGTG GCGACATATT TTGCCGAACA CCCTGGCTCC CATTATCGTC
TCCACGTCGT TCAGTATTCC GGCCTTGATC AGTGCCGAAG CAGTGCTGAC AATTCTCGGT
GTGGGAATGC GCCCCTCGCT CGATCCTGAC AATCCGTTTC CGACGAGTCT AGGTGTAATG
CTGACCGAGG GATACAACAA TTTGTCGTCG GGACCGTGGT TGCTAAGTTT CCCGGTAATC
CTCATTGCGG GGCTGATGCT CTCGTTTACC TTCCTTGGTG ATGGCTTACG CGATGCACTC
GATCCGCGCG AACGGTGA
 
Protein sequence
MTSPANTLTN PIDLQALQTK PRSLWSDAFH RLRRNRAAMV GLVVIILYVV VAVTAPWLAP 
YNPVQQIPNN SLRPPAWVTD NPARMGVPEH LLGTDTLGRD VLSRLMYAIR VSLIVGVVPQ
VAILLIGVTI GLISGFAGGW LDNLLMRFTE IVASFPDLLF IIALSTAFRE TWLGRTFNGL
LLIFIAVSLV SWTGIARLVR GQVLSLKEKE FIEAARAIGV PTATILWRHI LPNTLAPIIV
STSFSIPALI SAEAVLTILG VGMRPSLDPD NPFPTSLGVM LTEGYNNLSS GPWLLSFPVI
LIAGLMLSFT FLGDGLRDAL DPRER