| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2363 |
|---|
| Symbol | |
|---|
| ID | 7268713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 2872496 |
|---|
| End bp | 2873689 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643567192 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002463677 |
|---|
| Protein GI | 219849244 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.476785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.026678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTT ATCTTGCCCG CCGTTTCGTG CAAATGCTGC TCGTGGCCCT GATCGCAGCA
ATTTGTTCGT ATGGTTTGTT GTACCTGGTT CCCGGTGGGC CGATTGATCA GTTACTGGCC
GAACGTCAAA ATGCCGGGCA AAATCGTATT TCTGAAGATG ATATTCGCCG TGTCCGCGAA
CGGTTTGAAT TGGATATCTA TTTGCCGTTT CGCTTTACCC GCTGGTTGAT CGGTTGGCCG
GCCGGACCAC TCCCCGGTGG GATCGGAGCC GATTGGCAGG TGGGCTGTGC GGTGCCCGGC
CAGGTGCGCC TCCGCTACCC CGATGGGCGG ATCGAGGTGG TGGAAGAGGG TTGCGAAGTT
CCCGTGACAA TGGCCGATCT CGAAGGCCGG AAGGTGAGCC GTGGCATTGT CTTTGGTGAT
TTTGGTATCT CACAGGTGAT GCTGCGTGGC CGACCGGTGA TCGATTTGAT CATGACCCGC
TTGCCGTATA CCCTGTATCT GATGGGGACG TCGATCTTAC TTTCGATCCT CATCGCGGTA
CCGGTCGGCG TTTATTCGGC AGTAAAACAG TATTCGCGCT TTGACTACAT TATGACAACC
GTCGCCTTTA TCGGTGCATC GCTGCCGAGC TTTGTCTTCG GTATTTTTGC GATTTTGCTC
TTCTCGGTAT TGGCGAAGAA TGCCGGTTTG CCGTATTTGC CCCCCGGTGA TGCAGTAGGA
GTACGCGATT ATACGATCCC GCTGATCGGG ACGGTGCAGG CCGGTTCGTT GCTCGACCGT
TTCTTGCGGT TCTTGATGCC ATGTGGCGTG TTGACCTTCA TCAATATTGC CGGTTGGAGC
CGCTTTGTGC GCGGTAGTAT GCTCGAGGTC TTGAGTCTTG ATTATGTGCG CACTGCTCGC
GCAAAGGGTG TAGCCGAGCG GGTAGTTATC CTGAAGCACG CCCTGCGCAA TTCACTTATT
CCGTTTGTGA CCCTACTGGC CGGGATTTTG GTGGCCCTCT TTAGTGGGGC GTTGATTACC
GAGACGGTCT TCAATTGGCC GGGTATCGGT CGTTTGTTTA TTGATGCCCT CGGTCGTAAC
GATTATAATG TGGTGATGGC TTTGCTGATC ATCAATGTGG TGCTGTTATT GATCGGCATT
CTGATCACCG ATATTCTGTA TACGGTGGTT GACCCACGAA TTCGCTTGAC GTAA
|
|---|
| Protein sequence | MAGYLARRFV QMLLVALIAA ICSYGLLYLV PGGPIDQLLA ERQNAGQNRI SEDDIRRVRE
RFELDIYLPF RFTRWLIGWP AGPLPGGIGA DWQVGCAVPG QVRLRYPDGR IEVVEEGCEV
PVTMADLEGR KVSRGIVFGD FGISQVMLRG RPVIDLIMTR LPYTLYLMGT SILLSILIAV
PVGVYSAVKQ YSRFDYIMTT VAFIGASLPS FVFGIFAILL FSVLAKNAGL PYLPPGDAVG
VRDYTIPLIG TVQAGSLLDR FLRFLMPCGV LTFINIAGWS RFVRGSMLEV LSLDYVRTAR
AKGVAERVVI LKHALRNSLI PFVTLLAGIL VALFSGALIT ETVFNWPGIG RLFIDALGRN
DYNVVMALLI INVVLLLIGI LITDILYTVV DPRIRLT
|
|---|
| |