Gene Cagg_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2354 
SymbollysS 
ID7268704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2864062 
End bp2865552 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content56% 
IMG OID643567183 
Productlysyl-tRNA synthetase 
Protein accessionYP_002463668 
Protein GI219849235 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0808673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00196891 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTGGTTA TGGAATTAAA CGACCTACAA GCCCAACGCG CTGCCAAACT CGAACAATTG 
CGCGCTGCCG GTCTCGATCC ATACCCCCCA CGTTGCCGGC GTAGCCATAC GATCGGTCAA
GTACTCGCTG CGTTTGATGA ACTTGCCGCC GGTGAAGCCG TCGTAACCCT CGCCGGGCGA
ATTATCGGGG CGCGCCGCGT GATGGGCAAG ATTGCGTTTG CCCATATTGA AGACGGTACC
GGTGAAATTC AGCTCTGGCT GAGCCGAGCC GATCTCGGTG ATGAGTGGTT TGAGCGCTTT
CGCGACCAGA TCGATACGTT CGATATTGTC CAGGCAACCG GTACCCTCCG TCGCACTAAG
ACCGGTGAGC GGTCGTTATT CGTGCGCGAG ATGGCCGTAT TGGCTAAGGC GATTAATCCG
CCACCGGAAA AGTGGGCCGG TCTGCAAGAT GTCGAAGAGC GCCATCGTCA ACGTTACCTC
GACCTGATCG TCAATCGCGA GCGACGCGAT ATTTTTCGTG CCCGTGCGCA GGTGATGAGC
ACGATGCGGC GCGTGCTTGA CGATCGCGGC TTTCTTGAGG TCGAGACACC GGTTTTGCAA
CCGATCTACG GTGGTGCGGC TGCGCGTCCG TTTGTTACGT ACCACAATGC ACTTGGTCAG
AATCTCTATC TCCGGATCGC CACAGAACTC TACCTCAAGC GGTTAATCGT CGGTGGTTTT
CCCGGCGTGT ATGAGATCGG TAAAAACTTT CGCAACGAAG GTGTTGATCG ATCCCACAAC
CCTGAGTTTA CGATGATGGA GTGTTATCAG GCGTATGCCG ATTATCACGC CATGATGACC
CTCGTCGAAG AGATGTTGGG TGAGATTTGT CTCGCCGTTC ACGGCACGAC AACGATTAGC
TACCAGGGGC GCGAACTCGA TCTTCGCCCG CCATGGCCGC GGATCGCAAT GGCTGATGCG
ATTGTTGAGC GTACCGGTAT CGATATTACC CGGCATACCG ATCTGGATTC GTTGCACGCC
GCGATTGCCG ATCGTGGTCT GCGGGTTGAT CGGAAAACGT CATGGGCCAA ACAGGTTGAT
GAACTCTTCT CGGAGTTTGT TCAGCCCCAT CTTTTTCAGC CTACGTTTAT CATCGATTAT
CCGGTGGCGA TGTCGCCGCT GGCTAAGCGG ATTCCCGGTC GGCCCGATTT CACCGAACGC
TTTGAGGCGT TTATCGCCGG GATGGAGATC GGGAATGCGT TTACCGAGCT GAACGATCCC
TTTGATCAGG AAGAGCGTTT CCGCGAACAG TTACGGGCGT TTGCGGCCGG TGATGAAGAA
GCCCATCAGA TGGACGAAGA TTTTATCAAC GCCCTCCGCT ATGGGATGCC GCCAACCGGT
GGTCTTGGTA TCGGGATCGA TCGGTTGGTG ATGGTTCTCA CCGACCAGGC ATCGATCCGT
GAAGTGATCC TCTTCCCGCA TCTACGGGAA CGGTTGGAAG GACGGGGATG A
 
Protein sequence
MLVMELNDLQ AQRAAKLEQL RAAGLDPYPP RCRRSHTIGQ VLAAFDELAA GEAVVTLAGR 
IIGARRVMGK IAFAHIEDGT GEIQLWLSRA DLGDEWFERF RDQIDTFDIV QATGTLRRTK
TGERSLFVRE MAVLAKAINP PPEKWAGLQD VEERHRQRYL DLIVNRERRD IFRARAQVMS
TMRRVLDDRG FLEVETPVLQ PIYGGAAARP FVTYHNALGQ NLYLRIATEL YLKRLIVGGF
PGVYEIGKNF RNEGVDRSHN PEFTMMECYQ AYADYHAMMT LVEEMLGEIC LAVHGTTTIS
YQGRELDLRP PWPRIAMADA IVERTGIDIT RHTDLDSLHA AIADRGLRVD RKTSWAKQVD
ELFSEFVQPH LFQPTFIIDY PVAMSPLAKR IPGRPDFTER FEAFIAGMEI GNAFTELNDP
FDQEERFREQ LRAFAAGDEE AHQMDEDFIN ALRYGMPPTG GLGIGIDRLV MVLTDQASIR
EVILFPHLRE RLEGRG