Gene Cagg_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2345 
Symbol 
ID7268695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2853630 
End bp2854307 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID643567174 
Product4-vinyl reductase 4VR 
Protein accessionYP_002463659 
Protein GI219849226 
COG category 
COG ID 
TIGRFAM ID[TIGR02019] bacteriochlorophyll 4-vinyl reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00167342 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGATCC GCGACCGCCC CGACCACGAT CCGGTTGCCG ATATGCTGTT GGTCGATGCG 
TATATGCGTT GGGCCTTACT GGCGGCGGAA GAAGTGATCG GGCGCAACGG GTTAGCCGTG
GTCTTGCGCC AAGCCGGTCT TAGCCAGCTC ATCGGTAACT ATCCGCCCGA ACATCTGAAG
GCGACGAGTG GCCTCACCTT TTACCATTAC GCCTCGCTCA ACGCCGGTCT ACTCAACTTC
TTTGGCCGTT CGGCAAGGAG TATGGCACTA CGGATTGGAC GCCAGACCGC TCGATTGGCT
ATCGAGCAGC AGAGTGCGTT GTTCGGAACT GCGGCGTTAA TCGCCTCGAA AGTCTTGCCG
TTCGCTACCC AGGTCAAACT CGGCTTATCG GCGATGCAAG CCGGTTTACG TCGGCTTAGT
CAGGCAGTGA CCCAAGACCG GCGCCTGGCG ATTGAGGATC GTGGTGAGGC GTGGGCATAC
ATCGACTACA CGTGTTCGAT GTCAGCCGGT AAGCAAGCGG ATGAACCGAT CGGTTACATC
CAGTGCGGAA TCTTGCAAGA GGCATTGCAC TGGCAAACCG GGTATGAGTT TGCCGTCGAG
CAGATTGCCT GTCGGTCAAT GGGAGCACCG GCATCAATCT GGCTGGTGGC CAAAATGCCG
GCCTTGCCGG GGCGTTAA
 
Protein sequence
MEIRDRPDHD PVADMLLVDA YMRWALLAAE EVIGRNGLAV VLRQAGLSQL IGNYPPEHLK 
ATSGLTFYHY ASLNAGLLNF FGRSARSMAL RIGRQTARLA IEQQSALFGT AALIASKVLP
FATQVKLGLS AMQAGLRRLS QAVTQDRRLA IEDRGEAWAY IDYTCSMSAG KQADEPIGYI
QCGILQEALH WQTGYEFAVE QIACRSMGAP ASIWLVAKMP ALPGR