Gene Cagg_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2339 
Symbol 
ID7268689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2845593 
End bp2846522 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content57% 
IMG OID643567168 
Productornithine carbamoyltransferase 
Protein accessionYP_002463653 
Protein GI219849220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.235287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00582642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTTGC GACATTTTCT CTCGGCAGCC GATTTGAGCC GTGCTGAAGC CGAAGCGTTG 
CTCGACCGGG CAGCAGAGTT GAAAGCTGCG TGGCGTGCCG GTGTGACCAA CGACCGACCG
TTGTTGGGCC AGACGCTTGC ATTGGTCTTC GAGAAGCCTT CCCTGCGAAC GCGGGTGGCG
TTCGAGGCCG GGATGACCCA ACTTGGTGGT CATCCGTCGT ACCTTTCCGC CAATGACATC
GATATGGGCG GACGCGAGAG TGTGCCTGAT GTGGCACGGA ACCTGAGCCG TTGGGTAGCG
ATTATCGCTG CACGGGTCTT CAAACATGCA ACGGTTGAAA CGCTCGCGCG CTATGCAACG
GTACCGGTAA TCAATGCGCT GTCCGATCGA GAGCATCCGT GTCAGGCACT GGCCGATATG
CTAACCCTCC GCGAACGGTT TGGCCGGTTG CAAGGTTTAA CGCTGGCCTA CGTTGGTGAC
GGAAATAACG TGTGTCACTC GTTGATGTTG TTAGGAGCGA CATTAGGCGT TAATGTGCGG
GTTGGGTGTC CGGTGGATTA TCGTCCTGCT CCTGACATTA CCGAGCTGAC CGAGCAGTTA
GCCAACCAAC ACGATGCAAC TCTCACGATC ACTACTTCGC CGGTTGAGGC GGTGAGTGGT
GCGGATGCCG TGTATACTGA TGTATGGGCT TCGATGGGCC AAGAACATGA AGCAGCTCGT
CGTCGCCCCG TCTTTACGCC GTATCAGGTG AATGCAGCGC TGATGGCCCA TGCTGCACCG
CACGCACTGG CAATGCACTG TCTACCGGCG CATCGTGGTG AAGAGGTAAC GGCAGATGTG
ATCGATGGGC CGCAATCGGT TGTGTTTGAG CAAGCGGAGA ACCGCTTGCA TGTTCAGAAG
GCGCTAATCT TATTTTTGCT AGGAAAGTAG
 
Protein sequence
MTLRHFLSAA DLSRAEAEAL LDRAAELKAA WRAGVTNDRP LLGQTLALVF EKPSLRTRVA 
FEAGMTQLGG HPSYLSANDI DMGGRESVPD VARNLSRWVA IIAARVFKHA TVETLARYAT
VPVINALSDR EHPCQALADM LTLRERFGRL QGLTLAYVGD GNNVCHSLML LGATLGVNVR
VGCPVDYRPA PDITELTEQL ANQHDATLTI TTSPVEAVSG ADAVYTDVWA SMGQEHEAAR
RRPVFTPYQV NAALMAHAAP HALAMHCLPA HRGEEVTADV IDGPQSVVFE QAENRLHVQK
ALILFLLGK