| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2338 |
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| Symbol | |
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| ID | 7268688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2842298 |
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| End bp | 2845567 |
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| Gene Length | 3270 bp |
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| Protein Length | 1089 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643567167 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_002463652 |
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| Protein GI | 219849219 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.878035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.026565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCA ACCGGGCAAT CTTTGATCGG GCGATGGAAC AGTGCCGCGA GGCATCCGCA
AAAGGACGCT GGGAAGACTC GTTACGCGCT GCAGTGCGCG CCTTACAAGA GTTTCCCCAA
GATATTGAAG CGCGCACTGC GGCAGCCGTT GCCTTGTTCC AAACGAATCG GTTGGATAAA
GCATTGCAGG CGTTTAGCGA TCTGTACGAG GCCGACCCAA ACAATGCGTT CTATCTCAAT
TACATCGCTC AGTGCTATCG CCGTCAAGGA AACATTCCTG CCGCCGTCGA GGCCTACAGT
GCCCTGGCCG ATCTGCATAG CGCCCAGCAG CGCGCGCTGC AAGCTACTGA AGCGTTGCGT
GAATTACTGA CGTTACAGCC TGAACGAGAC GATCAGCGTC GGCGCTTGGC CCAGCTCTAC
GAAGACCTTG GCGCAATCGC CGAATCAGCC GAGACTCATC TTGAACTGGC CCAACGCTTT
ATCGCACGGG GAGAAACGGC TGAAGCGTTG TCTGAGGTCG AGTGGGTTTT GCGCCTCGAT
GCCAATCACC GCGTCGCCCG TGAATTGGCG ACGCGCCTAC GCGAACAACT GGGCGGGTCG
CCGAATCCAC CCCTTCGTGG CACCAGTAGC TTACGGGCAG CTTACCCTAC CAGCGCCCTT
CGCGGTTCGC AAACGCAACC TGAGCAGTTG ATCGCTGAAG CGATGGCCTG TCAGCAAGCG
GGTGATGAAG AGCGGGCTAT CGCTTTGTAC GAACAGGCGG TGCAAGCCGG GATCGAACGG
GCTGATGTCC TCTATTCACT CGGGCTACTG TACCAGAGTC AAGGTAATCT TAAAGCGGCT
GTCAGCGTTC TCACGCGCGC GGCCGGTGAC CCCGAGTACG CCCTGTCGGC CCACTTTGCG
CTTGGGCAAG TCTATCGTGA CCTCGGTCAA TTACCGCAAG CAGCGCAAGA ATTTGAGACG
ACCATCGGAT TGGTTGATCT CGAAACGATC GGCAAGGCCG AGGTTGATGA CCTGATTGCA
ATGTACGAGA GCGCGGCAAC GATTTATGAG CAACTGGGCG ATCTGGCTCG TGCCTCACTG
CTCTATGGTA CCCTTGCCGA GTTTCTGACC AGCAAGCGAT GGGGACGCGA TCGTGCTGCC
GAGTTCAAAA ATCGGGCCAA GGAACTGGCC GATCGCAATA TGTTCGCGAA GCTACGCACG
ATCGGTACCG GTGTTCTCCA GCCAACACCT GCCACACCAC CACCATCATC TCCACCGATA
ATTGACCCCG GAAGTGAGCG ATGGGGTAAG CTGCGCCCGA TTACCGATGT CTTGCGGTCA
GGTGGGCGTT CTGAAGAAGA CGTAACACCG GAGGTCACAC CGGCAACGCT CGAACAATTG
CCGATTATCG AGCGAATGAG CGTACCGACC AGCCTACCCA CGCCGGCGTT TCCACCACCG
ACGCCGCTCG ATCCGTCTGG TCTTGATGAG GTGACGGCCG GCTGGCTCGA ACTTAGTGGT
ACCTATCTCG AACAGGGTCT GCTCGATGCC GCTCTCGACG CTTGTATGGA GGTGATTCAT
CATAATGTCG AATATCTGCC CATCCACTTA CGGATGGGCG AGATCTACGA ACGGCAGGGG
CGTCCTGAAG AGGCATTGGC AAAATATCAG TTACTGATCG AGACGTATCA GGTGCGAGGC
GAAGCCGAGA AGGCGATTGA TGTCTATTTT CGCTTTATCG AGCTGTCACC CGATTCCATA
AATGCACGCT CGAAGTTGGC CGAGATACTA CGGCAGACCG GCCGTATCGA TGAAGCTGTC
GACCAGTCGT TACAGGTTGC CAATACCTAT TTTCGATTGG GTCAAACGAA TAAAGCGCTC
GAAGAGTTTC GCCGTTTGTT ACAATGGGCA CCCAAACATC GCGAGGGACA CGCTCAATAT
GGATTGGCCT TGCTCAAACT GGAGCGATTT GAAGCCGCAC TCGATGAATT TCGGCAGGCA
CTCGAACTCG GCTCACCGGA CGATCCGGTC GCGCTAGCAC GGCTCAACAT CACGCTCGCC
CTGATGGGCG AACAACCAAA TGTCATTTGG GACTCACTGG CCACCGTTCT AGAGCAATTA
CGCAAGCATC CCACTGAATT TGCTGCCGTT CAAGCGGAAT ACCGGGCTGC CCTGTTGATC
GACGACCGCG CGTTGCTCCA TTATATGCTG GCGATCATCC AACAACAGCA CGAGCAACAC
CATTTGGCGC TCCTTGAGCT TGAACAAGCT CAAATCTTGC TCAACAGCGA ACCCGACCCG
ATGCTCCCGC CAGCCCTCAT GTATCGCGCA ACCGCCGACA GTTATATTGC GTTAGGACAA
GCCGAGCAGG CACTCGAACA GTTACGCAAA GGGCAAGCCG TTGCCGAGCA GACAACGCCC
AACTCATCGA TCCGCCATCC ATTCGCCATT CCACCGTCGC GTGGCGATAT GGTGCGTCGC
ATGGCCGAAG CGTATGCGGT CAGTGATGAT TTAGTCGGGG CAGAGCAAGC GTTACTGGAA
GCGAAAAAGT TATTGCCATA TGACCGGGCG ATCTACACCA AGCTGGCGAA CGTTTATTTT
CGGCAGGGTA AGCTCGCCGA GGCATTGGCC CAACTCGATG AGCTGGCAAC GTATTACGAA
GAACGCCAAC AATTGGATTT AGCCATCGAG CTTCTCGAAT TCGCAGTACA GCTTGCTCCT
AACCATATCG GCATGAGTAA CCGGTTGGCG CGCTTACAAC TGCGGGTTGG GAAACTCGAC
CAGGGTTTAG CCGGGCTGGT GCGGGTCAGT GAACTACAAA AACGTGCCGG TCAATTGAAA
GATGCCGTTG CGTCGTTACA GGAAGTCGCG CAAACGTATT GGATGTTGAG TGATCATGAA
CGTGCGCGCG AGATGTACGA CCGAATTGTA CAGATAGCAC CGAACGATGT TGATGCGCGT
CAATGGTTGG CCCTTATGCA CACTCTCTCG CGTCGCACCA AAGAAGCGAT CAGCGAAAAG
AAGCAGATCG CGCGCATTTT TGCCCAACAA CGCGATTATG ACAATGCGAT TGCCGAGCTG
CACCAGATTA TTGGCCTCGA TCAGAACGAT TTAGAAGCCT ACTTCATGCT CTACGACATG
CTCATGCGAC GCGAGGAATA CGGACAGGCC AGCCAACTGT GTCGGCGCAT GTTGAAGATG
CCGGGAATTG AAACGGAACG GGTGGAAGCG ATGTTGAGCG CCGCCAATCG TATGCTTGAG
CAACGCAAGC CGGCGCCGCC ACAGAGTTGA
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| Protein sequence | MAGNRAIFDR AMEQCREASA KGRWEDSLRA AVRALQEFPQ DIEARTAAAV ALFQTNRLDK
ALQAFSDLYE ADPNNAFYLN YIAQCYRRQG NIPAAVEAYS ALADLHSAQQ RALQATEALR
ELLTLQPERD DQRRRLAQLY EDLGAIAESA ETHLELAQRF IARGETAEAL SEVEWVLRLD
ANHRVARELA TRLREQLGGS PNPPLRGTSS LRAAYPTSAL RGSQTQPEQL IAEAMACQQA
GDEERAIALY EQAVQAGIER ADVLYSLGLL YQSQGNLKAA VSVLTRAAGD PEYALSAHFA
LGQVYRDLGQ LPQAAQEFET TIGLVDLETI GKAEVDDLIA MYESAATIYE QLGDLARASL
LYGTLAEFLT SKRWGRDRAA EFKNRAKELA DRNMFAKLRT IGTGVLQPTP ATPPPSSPPI
IDPGSERWGK LRPITDVLRS GGRSEEDVTP EVTPATLEQL PIIERMSVPT SLPTPAFPPP
TPLDPSGLDE VTAGWLELSG TYLEQGLLDA ALDACMEVIH HNVEYLPIHL RMGEIYERQG
RPEEALAKYQ LLIETYQVRG EAEKAIDVYF RFIELSPDSI NARSKLAEIL RQTGRIDEAV
DQSLQVANTY FRLGQTNKAL EEFRRLLQWA PKHREGHAQY GLALLKLERF EAALDEFRQA
LELGSPDDPV ALARLNITLA LMGEQPNVIW DSLATVLEQL RKHPTEFAAV QAEYRAALLI
DDRALLHYML AIIQQQHEQH HLALLELEQA QILLNSEPDP MLPPALMYRA TADSYIALGQ
AEQALEQLRK GQAVAEQTTP NSSIRHPFAI PPSRGDMVRR MAEAYAVSDD LVGAEQALLE
AKKLLPYDRA IYTKLANVYF RQGKLAEALA QLDELATYYE ERQQLDLAIE LLEFAVQLAP
NHIGMSNRLA RLQLRVGKLD QGLAGLVRVS ELQKRAGQLK DAVASLQEVA QTYWMLSDHE
RAREMYDRIV QIAPNDVDAR QWLALMHTLS RRTKEAISEK KQIARIFAQQ RDYDNAIAEL
HQIIGLDQND LEAYFMLYDM LMRREEYGQA SQLCRRMLKM PGIETERVEA MLSAANRMLE
QRKPAPPQS
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