Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2312 |
Symbol | |
ID | 7266725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2815537 |
End bp | 2816079 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643567142 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002463627 |
Protein GI | 219849194 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.092004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCCC CTACTCATTC CACCATCGTG ACCGGGCTTC GACAGCGCGA CCCGCAGATT ATCGGCTGGC TCTACACGAC CTACGCCCCG CGCCTCATTG GCTACTTCAG CCGTCGCCTG CGCGACCCCG ACCTCGCCCG CGACCTGCAC CACGAATTGT TCCTGCGGCT GCTCGAACGC GCCCCCACCT TCACCGACCG GGGCGTGCCC ATCGAGGCGT GGCTTTTTCG CCTCGCCCAC GACCTCGTCG TCGATACCCA CCGGCGTGCC GGGCGGACCG TCCCGCTGAC CGAGGCCGCG CATCCTGCCG CCGACGACGA TGTCACCATC ACCTGCCTCC ACGCCGCCGA CCAGGCTGCG CTCCACCAGG CCCTCACCAC ACTGCCCCTG ACCTATCGGC GCGTGCTTAC CTTGCGCTTT TGCGACAACT GCTCGCTCGC CGATACCGCG CTTCAGCTCG GTCTCTCCCT CTCGGCCACT AAGGCCCTCC AACGTCGCGC CATCGCTTGC CTCCGCGCTC TCCTCTCCCC GCCGATGGCG TGA
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Protein sequence | MHSPTHSTIV TGLRQRDPQI IGWLYTTYAP RLIGYFSRRL RDPDLARDLH HELFLRLLER APTFTDRGVP IEAWLFRLAH DLVVDTHRRA GRTVPLTEAA HPAADDDVTI TCLHAADQAA LHQALTTLPL TYRRVLTLRF CDNCSLADTA LQLGLSLSAT KALQRRAIAC LRALLSPPMA
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